Basic Information:

  VIRBase ID:  

VHID00610632

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m59-1:  MIMAT0005548          Ywhab:  NM_018753     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m59-1	Ywhab
miRBase Accession/Entrez ID	MIMAT0005548	54401
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	1300003C17Rik//14-3-3b

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Ywhab	chr2:163995134-163995135(+) m6A 5'UTR       25412662//24981863//25569111 chr2:163995552-163995553(+) m6A 5'UTR//intron       25683224//25412662//24981863//25569111 chr2:163995832-163995833(+) m6A 5'UTR//intron       25412662//24981863//25569111//26404942//22608085 chr2:163995842-163995843(+) m6A 5'UTR//intron       25412662//24981863//25569111//26404942//22608085 chr2:164011642-164011643(+) m6A CDS       25683224//25412662//24981863//25569111//26404942//22608085 chr2:164011708-164011709(+) m6A CDS       25683224//25412662//24981863//25569111//26404942 chr2:164011714-164011715(+) m6A CDS       25683224//25412662//24981863//25569111//26404942 chr2:164011807-164011808(+) m6A CDS       25683224//25412662//24981863//25569111//26404942 chr2:164011814-164011815(+) m6A CDS       25683224//25412662//24981863//25569111 chr2:164011884-164011885(+) m6A CDS       25683224//25412662//24981863//25569111 chr2:164014015-164014016(+) m6A CDS       24981863//22608085 chr2:164014081-164014082(+) m6A CDS       22608085 chr2:164014124-164014125(+) m6A CDS       22608085 chr2:164016130-164016131(+) m6A CDS       25569111 chr2:164016157-164016158(+) m6A CDS       24981863//25569111//26404942 chr2:164016187-164016188(+) m6A CDS       24981863//25569111//26404942//22608085 chr2:164016684-164016685(+) m6A CDS       24981863//25569111//22608085 chr2:164016720-164016721(+) m6A CDS       24981863//25569111//22608085//22575960 chr2:164016794-164016795(+) m6A 3'UTR       25456834//24981863//25569111//26404942//22608085//22575960 chr2:164016800-164016801(+) m6A 3'UTR       25456834//24981863//25569111//26404942//22608085//22575960 chr2:164016818-164016819(+) m6A 3'UTR       25456834//24981863//25569111//26404942//22608085//22575960 chr2:164016868-164016869(+) m6A 3'UTR       25456834//24981863//25569111//26404942//22608085//22575960 chr2:164016896-164016897(+) m6A 3'UTR       25456834//24981863//25569111//26404942//22608085//22575960 chr2:164016979-164016980(+) m6A 3'UTR       24981863//25569111//26404942//22608085 chr2:164016984-164016985(+) m6A 3'UTR       24981863//25569111//26404942//22608085 chr2:164017018-164017019(+) m6A 3'UTR       24981863//25569111//26404942//22608085 chr2:164017041-164017042(+) m6A 3'UTR       25569111//26404942 chr2:164017157-164017158(+) m6A 3'UTR       22608085 chr2:164017805-164017806(+) m6A 3'UTR       26404942//22608085 chr2:164017878-164017879(+) m6A 3'UTR       24981863//26404942//22608085 chr2:164017886-164017887(+) m6A 3'UTR       24981863//26404942//22608085 chr2:164017894-164017895(+) m6A 3'UTR       24981863//26404942//22608085 chr2:164017971-164017972(+) m6A 3'UTR       24981863//26404942//22608085 chr2:164018005-164018006(+) m6A 3'UTR       24981863//26404942//22608085 chr2:164018020-164018021(+) m6A 3'UTR       24981863//26404942//22608085 chr2:164018028-164018029(+) m6A 3'UTR       24981863//26404942//22608085 chr2:164018047-164018048(+) m6A 3'UTR       26404942//22608085 chr2:164018061-164018062(+) m6A 3'UTR       26404942//22608085 chr2:164018071-164018072(+) m6A 3'UTR       26404942//22608085 chr2:164018132-164018133(+) m6A 3'UTR       26404942//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Ywhab	Exosome Mast cells     17486113

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m59-1
Interactor2: Ywhab

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar