Basic Information:

  VIRBase ID:  

VHID00610380

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m59-1:  MIMAT0005548          Ybx1:  NM_011732     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m59-1	Ybx1
miRBase Accession/Entrez ID	MIMAT0005548	22608
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	1700102N10//1700102N10Rik//C79409//dbp//dbpB//EF1//EF1A//MSY//MSY1//mYB-1a//Ns//Nsep1//YB-1

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Ybx1	chr4:119278250-119278251(-) m6A 3'UTR//exon       24981863//25569111 chr4:119278294-119278295(-) m6A 3'UTR//exon       24981863//25569111 chr4:119278313-119278314(-) m6A 3'UTR//exon       24981863//25569111 chr4:119279032-119279033(-) m6A CDS//exon       25412662//24981863//25569111 chr4:119279051-119279052(-) m6A CDS//exon       25412662//24981863//25569111 chr4:119279058-119279059(-) m6A CDS//exon       25412662//24981863//25569111 chr4:119279088-119279089(-) m6A CDS//exon       25412662//24981863//25569111 chr4:119279128-119279129(-) m6A CDS//exon       25412662//24981863//25569111 chr4:119279151-119279152(-) m6A CDS//exon       25412662//24981863 chr4:119279180-119279181(-) m6A CDS//exon       25412662//24981863 chr4:119279310-119279311(-) m6A exon//intron       25412662//24981863//22608085 chr4:119281583-119281584(-) m6A CDS//exon       24981863//22608085 chr4:119281607-119281608(-) m6A CDS//exon       24981863//22608085 chr4:119281616-119281617(-) m6A CDS//exon       24981863//25569111//22608085 chr4:119282202-119282203(-) m6A CDS       24981863//25569111//22608085 chr4:119282380-119282381(-) m6A CDS//exon       24981863//25569111//22608085 chr4:119282812-119282813(-) m6A CDS//intron       24981863//25569111//22608085 chr4:119293658-119293659(-) m6A exon//intron       24981863//25569111 chr4:119293787-119293788(-) m6A CDS//exon       24981863//25456834//25569111 chr4:119294217-119294218(-) m6A CDS//exon       25412662//24981863//25456834//25569111 chr4:119294344-119294345(-) m6A CDS//exon       25683224//25412662//24981863//25456834//25569111 chr4:119294469-119294470(-) m6A 5'UTR//exon       25683224//25412662//24981863//25456834//25569111//22608085 chr4:119294565-119294566(-) m6A 5'UTR       25412662//24981863//25569111 chr4:119294577-119294578(-) m6A 5'UTR       24981863 chr4:119294599-119294600(-) m6A 5'UTR       24981863

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m59-1
Interactor2: Ybx1

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar