Basic Information:

  VIRBase ID:  

VHID00610358

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m59-1:  MIMAT0005548          Vav2:  NR_133905     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m59-1	Vav2
miRBase Accession/Entrez ID	MIMAT0005548	22325
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	2810040F13Rik//AI847175//Vav-2

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	Vav2	chr2:27119226(-) A-I      3'UTR

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	Vav2	chr2:27263706(-) A-I exon 3'UTR    22524474

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Vav2	chr2:27262121-27262122(-) m6A 3'UTR       24981863 chr2:27262144-27262145(-) m6A 3'UTR       25683224//24981863 chr2:27262180-27262181(-) m6A 3'UTR       25683224//25412662//24981863//25456834//25569111 chr2:27262249-27262250(-) m6A 3'UTR       25683224//25412662//24981863//25456834//25569111 chr2:27262274-27262275(-) m6A 3'UTR       25683224//25412662//24981863//25456834//25569111 chr2:27262287-27262288(-) m6A 3'UTR       25683224//25412662//24981863//25569111 chr2:27262292-27262293(-) m6A 3'UTR       25683224//25412662//24981863//25569111 chr2:27262718-27262719(-) m6A 3'UTR       25412662 chr2:27262807-27262808(-) m6A 3'UTR       25412662 chr2:27262943-27262944(-) m6A 3'UTR       25412662 chr2:27262968-27262969(-) m6A 3'UTR       25412662 chr2:27262990-27262991(-) m6A 3'UTR       25412662 chr2:27263834-27263835(-) m6A 3'UTR       25683224//25456834//25569111 chr2:27263841-27263842(-) m6A 3'UTR       25683224//24981863//25456834//25569111 chr2:27263929-27263930(-) m6A 3'UTR       24981863//25569111 chr2:27264076-27264077(-) m6A 3'UTR       25683224//25569111 chr2:27264144-27264145(-) m6A 3'UTR       25683224//25569111 chr2:27264149-27264150(-) m6A 3'UTR       25683224//25569111 chr2:27264155-27264156(-) m6A 3'UTR       25683224//25569111 chr2:27267240-27267241(-) m6A 3'UTR//CDS       25683224//25412662 chr2:27267263-27267264(-) m6A 3'UTR//CDS       25683224//25412662 chr2:27267326-27267327(-) m6A CDS       25683224//25412662 chr2:27288649-27288650(-) m6A CDS       25412662//24981863//22608085 chr2:27288657-27288658(-) m6A CDS       25412662//24981863//22608085 chr2:27291382-27291383(-) m6A CDS       25412662//24981863//22608085 chr2:27291395-27291396(-) m6A CDS       25412662//24981863//22608085 chr2:27291860-27291861(-) m6A CDS       25412662//22608085 chr2:27292688-27292689(-) m6A CDS       25412662//22608085 chr2:27292712-27292713(-) m6A CDS       25412662//22608085 chr2:27299414-27299415(-) m6A CDS       24981863 chr2:27302038-27302039(-) m6A CDS//exon       25683224//25412662//24981863 chr2:27302089-27302090(-) m6A CDS//exon       25683224//25412662//24981863 chr2:27302092-27302093(-) Y CDS//exon       26075521 chr2:27318976-27318977(-) m6A CDS//exon       25412662 chr2:27426303-27426304(-) m6A CDS       25412662//24981863 chr2:27426630-27426631(-) m6A 5'UTR       25412662//24981863//25569111 chr2:27426746-27426747(-) m6A 5'UTR       25683224//25456834//25412662//24981863//25569111 chr2:27426767-27426768(-) m6A 5'UTR       25683224//25456834//25412662//24981863//25569111 chr2:27426961-27426962(-) m6A 5'UTR       25412662//24981863//25569111

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m59-1
Interactor2: Vav2

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar