Basic Information:

  VIRBase ID:  

VHID00610169

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m59-1:  MIMAT0005548          Rpl10a:  NM_011287     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m59-1	Rpl10a
miRBase Accession/Entrez ID	MIMAT0005548	19896
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	CsA-//CsA-19//Nedd//Nedd6

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Rpl10a	chr17:28328866-28328867(+) m6A CDS//exon       25412662//22608085 chr17:28329004-28329005(+) m6A CDS//exon       25412662//22608085 chr17:28329022-28329023(+) m6A CDS//exon       25412662//22608085 chr17:28329121-28329122(+) m6A 3'UTR//exon//intron       25412662//22608085 chr17:28329177-28329178(+) m6A 3'UTR//exon//intron       25412662 chr17:28329198-28329199(+) m6A 3'UTR//exon//intron       25412662 chr17:28329420-28329421(+) m6A 3'UTR//CDS//exon       25412662//22608085 chr17:28329468-28329469(+) m6A 3'UTR//CDS//exon       25412662//22608085 chr17:28329498-28329499(+) m6A 3'UTR//CDS//exon       25412662//22608085 chr17:28329546-28329547(+) m6A exon//intron       25412662//22608085 chr17:28330599-28330600(+) m6A 3'UTR//CDS//exon       25412662//22608085 chr17:28330641-28330642(+) m6A 3'UTR//CDS//exon       25412662//22608085 chr17:28330935-28330936(+) m6A 3'UTR//CDS//exon       25412662//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Rpl10a	Axon Motor neurons     24152552 Exosome Mast cells     17486113

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m59-1
Interactor2: Rpl10a

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar