Basic Information:

  VIRBase ID:  

VHID00609446

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m59-1:  MIMAT0005548          Ap3b1:  NM_009680     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m59-1	Ap3b1
miRBase Accession/Entrez ID	MIMAT0005548	11774
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	AP//AP-3//AU015684//beta3A//C78395//Hp//Hps2//pe//pearl//ri//rim2

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Ap3b1	chr13:94359009-94359010(+) m6A 5'UTR       24981863//25569111 chr13:94359054-94359055(+) m6A 5'UTR       24981863//25412662//25569111 chr13:94359118-94359119(+) Y CDS//exon       26075521 chr13:94390799-94390800(+) m6A CDS       25412662//25569111 chr13:94394747-94394748(+) m6A CDS       25412662//22608085 chr13:94394785-94394786(+) m6A CDS       25412662//22608085 chr13:94403381-94403382(+) m6A CDS       22608085 chr13:94403389-94403390(+) m6A CDS       22608085 chr13:94408832-94408833(+) m6A CDS       22608085 chr13:94440270-94440271(+) m6A CDS       24981863//22608085 chr13:94440282-94440283(+) m6A CDS       24981863//22608085 chr13:94440351-94440352(+) m6A CDS       24981863 chr13:94440357-94440358(+) m6A CDS       24981863 chr13:94440364-94440365(+) m6A CDS       24981863 chr13:94462568-94462569(+) m6A CDS       24981863 chr13:94471724-94471725(+) m6A CDS       24981863 chr13:94471739-94471740(+) m6A CDS       24981863 chr13:94476977-94476978(+) m6A CDS       25683224//25412662//24981863 chr13:94476992-94476993(+) m6A CDS       25683224//25412662//24981863 chr13:94477006-94477007(+) m6A CDS       25683224//25412662//24981863 chr13:94477101-94477102(+) m6A CDS       25683224//25412662//24981863//25456834 chr13:94479753-94479754(+) m6A CDS       25683224//25412662//24981863//25456834 chr13:94479768-94479769(+) m6A CDS       25683224//25412662//24981863 chr13:94479780-94479781(+) m6A CDS       25683224//25412662//24981863 chr13:94479793-94479794(+) m6A CDS       25683224//25412662//24981863 chr13:94479798-94479799(+) m6A CDS       25683224//25412662//24981863 chr13:94479806-94479807(+) m6A CDS       25683224//25412662//24981863 chr13:94479852-94479853(+) m6A CDS       25683224//25412662//24981863 chr13:94479860-94479861(+) m6A CDS       25683224//25412662//24981863 chr13:94483244-94483245(+) m6A CDS       25683224//25412662//24981863 chr13:94483292-94483293(+) m6A CDS       25683224//25412662//24981863 chr13:94493682-94493683(+) m6A CDS       25683224//25412662//24981863 chr13:94493697-94493698(+) m6A CDS       25683224//25412662//24981863 chr13:94501995-94501996(+) m6A CDS       24981863//25569111//22608085 chr13:94528194-94528195(+) m6A CDS       24981863//25569111//22608085 chr13:94528229-94528230(+) m6A CDS       24981863 chr13:94528256-94528257(+) m6A CDS       24981863 chr13:94565773-94565774(+) m6A 3'UTR       24981863//25569111 chr13:94565958-94565959(+) m6A 3'UTR       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Ap3b1	Nucleus Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m59-1
Interactor2: Ap3b1

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar