Basic Information:

  VIRBase ID:  

VHID00609332

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-M55-1:  MIMAT0005547          Klf4:  NM_010637     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-M55-1	Klf4
miRBase Accession/Entrez ID	MIMAT0005547	16600
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	EZF//Gkl//Gklf//Zi//Zie

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Klf4	chr4:55527324-55527325(-) m6A 3'UTR       25569111 chr4:55527402-55527403(-) m6A 3'UTR       25569111 chr4:55527590-55527591(-) m6A 3'UTR       25683224//25456834//25569111 chr4:55527722-55527723(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111 chr4:55527803-55527804(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111 chr4:55527813-55527814(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111 chr4:55527872-55527873(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111 chr4:55527893-55527894(-) m6A 3'UTR       25683224//25456834//24981863//25569111 chr4:55527906-55527907(-) m6A 3'UTR       25683224//25456834//24981863//25569111 chr4:55527914-55527915(-) m6A 3'UTR       25683224//25456834//24981863//25569111 chr4:55527922-55527923(-) m6A 3'UTR       25683224//25456834//24981863//25569111 chr4:55527937-55527938(-) m6A 3'UTR       25683224//25456834//24981863//25569111 chr4:55527942-55527943(-) m6A 3'UTR       25683224//25456834//24981863//25569111 chr4:55528158-55528159(-) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr4:55528217-55528218(-) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr4:55528238-55528239(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr4:55528292-55528293(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr4:55529726-55529727(-) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr4:55529765-55529766(-) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr4:55529804-55529805(-) m6A CDS       25683224//25456834//24981863//25569111 chr4:55530036-55530037(-) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr4:55530111-55530112(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr4:55530120-55530121(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr4:55530128-55530129(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr4:55530154-55530155(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr4:55530224-55530225(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22575960 chr4:55530492-55530493(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22575960 chr4:55530552-55530553(-) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr4:55530798-55530799(-) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr4:55530804-55530805(-) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr4:55530829-55530830(-) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr4:55530897-55530898(-) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr4:55530968-55530969(-) m6A 5'UTR//CDS       25683224//25412662//24981863//25569111 chr4:55531658-55531659(-) m6A CDS//intron       25683224//25412662//24981863//25569111 chr4:55531891-55531892(-) m6A 5'UTR       25456834//25569111 chr4:55531901-55531902(-) m6A 5'UTR       25683224//24981863//25456834//25569111 chr4:55532033-55532034(-) m6A 5'UTR       25683224//25456834//24981863//25569111 chr4:55532045-55532046(-) m6A 5'UTR       25683224//25456834//24981863//25569111 chr4:55532122-55532123(-) m6A 5'UTR       25683224//25456834//25412662//24981863//25569111 chr4:55532160-55532161(-) m6A 5'UTR       25683224//25456834//25412662//24981863//25569111 chr4:55532212-55532213(-) m6A 5'UTR       25683224//25412662//24981863//25569111 chr4:55532299-55532300(-) m6A 5'UTR       25683224//25412662//24981863//25569111

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Klf4	Exosome Mast cells     17486113

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-M55-1
Interactor2: Klf4

Evidence Support:

Prediction-Evidence	Rep
Support Database	RepTar