Basic Information:

  VIRBase ID:  

VHID00609258

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-M44-1:  MIMAT0005546          Opa3:  NM_207525     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-M44-1	Opa3
miRBase Accession/Entrez ID	MIMAT0005546	403187
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	D630048P19Rik//Gm1425//Gm472

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Opa3	chr7:19228556-19228557(+) m6A CDS//exon       25683224//24981863//25569111 chr7:19228674-19228675(+) m6A exon//intron       25683224//24981863//25569111 chr7:19229105-19229106(+) m6A exon//intron       25683224//24981863//25569111 chr7:19244926-19244927(+) m6A CDS//intron       25683224//25456834//25412662//24981863//25569111//22608085 chr7:19244952-19244953(+) m6A CDS//intron       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr7:19245169-19245170(+) m6A 3'UTR//intron       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr7:19245247-19245248(+) m6A 3'UTR//intron       25683224//25456834//24981863//25569111//22608085//22575960 chr7:19245256-19245257(+) m6A 3'UTR//intron       25683224//25456834//24981863//25569111//22608085//22575960 chr7:19245384-19245385(+) m6A 3'UTR//intron       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr7:19245400-19245401(+) m6A 3'UTR//intron       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr7:19245441-19245442(+) m6A 3'UTR//intron       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr7:19245470-19245471(+) m6A 3'UTR//intron       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr7:19245515-19245516(+) m6A 3'UTR//intron       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr7:19246232-19246233(+) m6A 3'UTR//intron       - chr7:19246477-19246478(+) m6A 3'UTR//intron       25683224//25456834//24981863//25569111//22608085 chr7:19246485-19246486(+) m6A 3'UTR//intron       25683224//25456834//24981863//25569111//22608085 chr7:19246600-19246601(+) m6A 3'UTR//intron       25683224//24981863//25456834//25569111//22608085 chr7:19246612-19246613(+) m6A 3'UTR//intron       25683224//24981863//25456834//25569111//22608085 chr7:19246625-19246626(+) m6A 3'UTR//intron       25683224//24981863//25456834//25569111//22608085 chr7:19246668-19246669(+) m6A 3'UTR//intron       25683224//24981863//25456834//22608085 chr7:19246681-19246682(+) m6A 3'UTR//intron       25683224//24981863//25456834//22608085 chr7:19246746-19246747(+) m6A 3'UTR//intron       25683224//24981863//25569111//22608085 chr7:19246798-19246799(+) m6A 3'UTR//intron       25683224//24981863//25456834//25569111//22608085 chr7:19246815-19246816(+) m6A 3'UTR//intron       25683224//25412662//24981863//25456834//25569111 chr7:19246820-19246821(+) m6A 3'UTR//intron       25683224//25412662//24981863//25456834//25569111 chr7:19246841-19246842(+) m6A 3'UTR//intron       25683224//25412662//24981863//25456834//25569111 chr7:19246893-19246894(+) m6A 3'UTR//intron       25683224//25412662//24981863//25456834//25569111//22608085 chr7:19246906-19246907(+) m6A 3'UTR//intron       25683224//25412662//24981863//25456834//25569111//22608085 chr7:19246925-19246926(+) m6A 3'UTR//intron       25683224//25412662//24981863//25456834//25569111//22608085 chr7:19246966-19246967(+) m6A 3'UTR//intron       25683224//25412662//24981863//25569111//22608085 chr7:19246985-19246986(+) m6A 3'UTR//intron       25683224//25412662//24981863//25569111//22608085 chr7:19246993-19246994(+) m6A 3'UTR//intron       25683224//25412662//24981863//25569111 chr7:19247215-19247216(+) m6A 3'UTR//intron       25683224//22608085 chr7:19247221-19247222(+) m6A 3'UTR//intron       25683224//22608085 chr7:19247233-19247234(+) m6A 3'UTR//intron       25683224//22608085 chr7:19247312-19247313(+) m6A 3'UTR//intron       25683224//22608085 chr7:19247319-19247320(+) m6A 3'UTR//intron       25683224//22608085 chr7:19247326-19247327(+) m6A 3'UTR//intron       25683224//22608085 chr7:19247354-19247355(+) m6A 3'UTR//intron       25683224//22608085 chr7:19247694-19247695(+) m6A 3'UTR//intron       25683224//24981863//25569111 chr7:19247847-19247848(+) m6A 3'UTR//intron       25683224 chr7:19255536-19255537(+) m6A CDS       25683224//25412662 chr7:19255604-19255605(+) m6A CDS       25683224//25412662//25569111 chr7:19255652-19255653(+) m6A CDS       25683224//25456834//25412662//25569111 chr7:19255708-19255709(+) m6A CDS       25683224//25456834//25412662//25569111 chr7:19255765-19255766(+) m6A CDS       25683224//25456834//25412662//25569111 chr7:19255809-19255810(+) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr7:19255850-19255851(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111 chr7:19255869-19255870(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111 chr7:19255956-19255957(+) m6A 3'UTR       25683224//25456834//25569111 chr7:19256026-19256027(+) m6A 3'UTR       25456834 chr7:19256037-19256038(+) m6A 3'UTR       25456834 chr7:19256061-19256062(+) m6A 3'UTR       25456834

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Opa3	Cytoplasm Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-M44-1
Interactor2: Opa3

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar