Basic Information:

  VIRBase ID:  

VHID00608960

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-M44-1:  MIMAT0005546          Ffar2:  NM_001168510     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-M44-1	Ffar2
miRBase Accession/Entrez ID	MIMAT0005546	233079
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	GPCR43//Gpr//Gpr43

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Ffar2	chr7:30818745-30818746(-) m6A 3'UTR       25683224//25412662//24981863 chr7:30818921-30818922(-) m6A 3'UTR       25683224//24981863 chr7:30818962-30818963(-) m6A 3'UTR       25683224//24981863 chr7:30819051-30819052(-) m6A 3'UTR       25683224//25412662//24981863//25569111 chr7:30819175-30819176(-) m6A CDS       25456834//25412662//24981863//25569111 chr7:30819185-30819186(-) m6A CDS       25456834//25412662//24981863//25569111 chr7:30819197-30819198(-) m6A CDS       25456834//25412662//24981863//25569111 chr7:30819613-30819614(-) m6A CDS       24981863//25569111 chr7:30819634-30819635(-) m6A CDS       24981863//25569111 chr7:30819661-30819662(-) m6A CDS       24981863//25569111 chr7:30819949-30819950(-) m6A CDS       24981863 chr7:30820102-30820103(-) m6A CDS       25412662//24981863 chr7:30820195-30820196(-) m6A 5'UTR//intron       25683224//25412662//24981863 chr7:30820220-30820221(-) m6A 5'UTR//intron       25683224//25412662//24981863 chr7:30820230-30820231(-) m6A 5'UTR//intron       25683224//25412662//24981863 chr7:30820237-30820238(-) m6A 5'UTR//intron       25683224//25412662//24981863 chr7:30820247-30820248(-) m6A 5'UTR//intron       25683224//25412662//24981863 chr7:30820689-30820690(-) m6A 5'UTR       25683224//25412662//24981863 chr7:30820697-30820698(-) m6A 5'UTR       25683224//25412662//24981863 chr7:30820711-30820712(-) m6A 5'UTR       25683224//25412662//24981863 chr7:30820722-30820723(-) m6A 5'UTR       25412662//24981863 chr7:30820768-30820769(-) m6A 5'UTR//intron       25412662//24981863 chr7:30820787-30820788(-) m6A 5'UTR//intron       25412662//24981863 chr7:30820898-30820899(-) m6A 5'UTR//intron       24981863 chr7:30820950-30820951(-) m6A 5'UTR//intron       24981863 chr7:30820967-30820968(-) m6A 5'UTR//intron       24981863 chr7:30820974-30820975(-) m6A 5'UTR//intron       24981863 chr7:30821110-30821111(-) m6A 5'UTR//intron       24981863 chr7:30821124-30821125(-) m6A 5'UTR//intron       24981863 chr7:30821135-30821136(-) m6A 5'UTR//intron       24981863 chr7:30821519-30821520(-) m6A 5'UTR//intron       25412662//24981863 chr7:30821547-30821548(-) m6A 5'UTR//intron       25412662 chr7:30821607-30821608(-) m6A 5'UTR//intron       25412662 chr7:30821623-30821624(-) m6A 5'UTR//intron       25412662 chr7:30821633-30821634(-) m6A 5'UTR//intron       25412662 chr7:30821644-30821645(-) m6A 5'UTR//intron       25412662

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Ffar2	Exosome Mast cells     17486113

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-M44-1
Interactor2: Ffar2

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar