Detail Information

Basic Information:


  VIRBase ID:  

VHID00608810

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-M44-1:           Nlgn2:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol mcmv-miR-M44-1 Nlgn2
miRBase
Accession/Entrez ID		 MIMAT0005546 216856
Organism Murid betaherpesvirus 1 Mus musculus
Category miRNA mRNA
Alias - N//NL//NL2//NLG2

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase Nlgn2
chr11:69823170-69823171(-) m6A 3'UTR       24981863//25456834//25569111//22608085
chr11:69823246-69823247(-) m6A 3'UTR       25683224//24981863//25569111//22608085
chr11:69823266-69823267(-) m6A 3'UTR       25683224//24981863//25569111//22608085
chr11:69823355-69823356(-) m6A 3'UTR       25683224//24981863//25569111
chr11:69823497-69823498(-) m6A 3'UTR       25683224//24981863//22608085
chr11:69823562-69823563(-) m6A 3'UTR       25683224//24981863
chr11:69823604-69823605(-) m6A 3'UTR       25683224//25412662//24981863//25456834//22608085
chr11:69823668-69823669(-) m6A 3'UTR       25683224//25412662//24981863//25456834//22608085
chr11:69823677-69823678(-) m6A 3'UTR       25683224//25412662//24981863//25456834//22608085
chr11:69823738-69823739(-) m6A 3'UTR       25683224//25412662//24981863//25456834//25569111//22608085
chr11:69823858-69823859(-) m6A 3'UTR       25412662//24981863//22608085
chr11:69824055-69824056(-) m6A 3'UTR       25683224//25412662//24981863//25569111
chr11:69824076-69824077(-) m6A 3'UTR       25683224//25412662//24981863//25569111
chr11:69824121-69824122(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//26404942
chr11:69824219-69824220(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//26404942//22608085
chr11:69824243-69824244(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085
chr11:69824254-69824255(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085
chr11:69824379-69824380(-) m6A 3'UTR       25683224//25412662//24981863//25569111
chr11:69824421-69824422(-) m6A 3'UTR       25683224//25412662//24981863//25569111
chr11:69824483-69824484(-) m6A 3'UTR       25683224//25412662//25569111
chr11:69824578-69824579(-) m6A 3'UTR       25683224//24981863//25569111
chr11:69824629-69824630(-) m6A 3'UTR       25683224//24981863//25569111
chr11:69824674-69824675(-) m6A 3'UTR       25683224//24981863//25569111
chr11:69824758-69824759(-) m6A 3'UTR       25683224//24981863//25569111
chr11:69824912-69824913(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085
chr11:69824963-69824964(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085
chr11:69824996-69824997(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085
chr11:69825010-69825011(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085
chr11:69825073-69825074(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960
chr11:69825098-69825099(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960
chr11:69825134-69825135(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085
chr11:69825443-69825444(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085
chr11:69825605-69825606(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960
chr11:69825698-69825699(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960
chr11:69825955-69825956(-) m6A CDS       25683224//25456834//25412662//24981863//25569111
chr11:69826052-69826053(-) m6A CDS       25683224//25456834//25412662//24981863//25569111
chr11:69826747-69826748(-) m6A CDS       25683224//25456834//25412662//24981863//25569111
chr11:69826762-69826763(-) m6A CDS       25683224//25456834//25412662//24981863//25569111
chr11:69827029-69827030(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//26404942//22608085
chr11:69827052-69827053(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//26404942//22608085
chr11:69827067-69827068(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//26404942//22608085
chr11:69827089-69827090(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//26404942//22608085
chr11:69827133-69827134(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//26404942//22608085
chr11:69827199-69827200(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//26404942//22608085
chr11:69827736-69827737(-) m6A CDS       25683224//25569111//22608085
chr11:69827790-69827791(-) m6A CDS       25683224//25569111//22608085
chr11:69828118-69828119(-) m6A CDS//exon       25683224//25412662//22608085
chr11:69828151-69828152(-) m6A CDS//exon       25683224//25412662//22608085
chr11:69828441-69828442(-) m6A CDS//exon       25683224//22608085
chr11:69830567-69830568(-) m6A CDS//intron       25683224//25412662
chr11:69834019-69834020(-) m6A CDS       25683224//25412662//22608085
chr11:69834031-69834032(-) m6A CDS       25683224//25412662//22608085
chr11:69834112-69834113(-) m6A CDS       25683224//25412662//22608085
chr11:69834304-69834305(-) m6A CDS       25412662
chr11:69834603-69834604(-) m6A 5'UTR       25683224//25412662//24981863
chr11:69837107-69837108(-) m6A 5'UTR       25412662//24981863
chr11:69837357-69837358(-) m6A 5'UTR       25683224//25412662//24981863//25569111
chr11:69837391-69837392(-) m6A 5'UTR       25683224//25456834//25412662//24981863//25569111
chr11:69837433-69837434(-) m6A 5'UTR       25683224//25456834//25412662//24981863//25569111
chr11:69837591-69837592(-) m6A 5'UTR       25683224//25412662//24981863//25569111//22608085

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate Nlgn2
Exosome Mast cells     17486113

Interaction Network (The top 100 interactions):


Interactor1: mcmv-miR-M44-1
Interactor2: Nlgn2

Evidence Support:


Prediction-Evidence cRep//Rep
Support Database RepTar

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