Basic Information:

  VIRBase ID:  

VHID00608751

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-M44-1:  MIMAT0005546          Chpt1:  NR_027477     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-M44-1	Chpt1
miRBase Accession/Entrez ID	MIMAT0005546	212862
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	-

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Chpt1	chr10:88471020-88471021(-) m6A 3'UTR//intron       24981863 chr10:88471045-88471046(-) m6A 3'UTR//intron       24981863 chr10:88471058-88471059(-) m6A 3'UTR//intron       24981863 chr10:88471077-88471078(-) m6A 3'UTR//intron       24981863 chr10:88471100-88471101(-) m6A 3'UTR//intron       24981863 chr10:88471124-88471125(-) m6A 3'UTR//intron       24981863 chr10:88471545-88471546(-) m6A 3'UTR//intron       25412662 chr10:88471567-88471568(-) m6A 3'UTR//intron       25683224//25412662 chr10:88475048-88475049(-) m6A 3'UTR//intron       26404942 chr10:88475365-88475366(-) m6A 3'UTR//intron       24981863//25456834//25569111 chr10:88475428-88475429(-) m6A 3'UTR//CDS       24981863//25569111 chr10:88475451-88475452(-) m6A 3'UTR//CDS       24981863//25569111 chr10:88475462-88475463(-) m6A 3'UTR//CDS       24981863//25569111 chr10:88475476-88475477(-) m6A 3'UTR//CDS       24981863//25569111 chr10:88503706-88503707(-) m6A CDS       25412662

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Chpt1	Nucleus Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-M44-1
Interactor2: Chpt1

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar