Basic Information:

  VIRBase ID:  

VHID00608741

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-M44-1:  MIMAT0005546          Arfgef1:  NM_001102430     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-M44-1	Arfgef1
miRBase Accession/Entrez ID	MIMAT0005546	211673
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	ARFG//ARFGEP1//BIG//BIG1//D130059B05Rik//D730028O18Rik//P20//P200

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Arfgef1	chr1:10137845-10137846(-) m6A 3'UTR       24981863 chr1:10137963-10137964(-) m6A 3'UTR       24981863//25456834 chr1:10137969-10137970(-) m6A 3'UTR       24981863//25456834 chr1:10138000-10138001(-) m6A 3'UTR       24981863 chr1:10138040-10138041(-) m6A 3'UTR       24981863 chr1:10138057-10138058(-) m6A 3'UTR       24981863 chr1:10138169-10138170(-) m6A 3'UTR       24981863 chr1:10138182-10138183(-) m6A 3'UTR       24981863 chr1:10138503-10138504(-) m6A 3'UTR       24981863 chr1:10138841-10138842(-) m6A CDS//exon       24981863 chr1:10138852-10138853(-) m6A CDS//exon       24981863 chr1:10138858-10138859(-) m6A CDS//exon       24981863 chr1:10138927-10138928(-) m6A CDS//exon       24981863//25569111 chr1:10172938-10172939(-) m6A CDS       22608085 chr1:10173089-10173090(-) m6A 3'UTR//intron       22608085 chr1:10173186-10173187(-) m6A CDS//intron       - chr1:10174148-10174149(-) m6A CDS       22608085 chr1:10174185-10174186(-) m6A CDS       22608085 chr1:10179927-10179928(-) m6A CDS       24981863 chr1:10180873-10180874(-) m6A CDS       24981863 chr1:10180900-10180901(-) m6A CDS       24981863 chr1:10180908-10180909(-) m6A CDS       24981863 chr1:10184389-10184390(-) m6A CDS       24981863//22608085 chr1:10184454-10184455(-) m6A CDS       24981863 chr1:10184484-10184485(-) m6A CDS       24981863 chr1:10188770-10188771(-) m6A CDS       24981863 chr1:10188809-10188810(-) m6A CDS       24981863 chr1:10188882-10188883(-) m6A CDS       24981863 chr1:10188900-10188901(-) m6A CDS       24981863 chr1:10188907-10188908(-) m6A CDS       24981863 chr1:10188917-10188918(-) m6A CDS       24981863//22608085 chr1:10188947-10188948(-) m6A CDS       24981863//22608085 chr1:10189235-10189236(-) m6A CDS       24981863//22608085 chr1:10189249-10189250(-) m6A CDS       24981863//22608085 chr1:10189459-10189460(-) m6A CDS       22608085 chr1:10199853-10199854(-) m6A CDS       22608085 chr1:10204821-10204822(-) m6A CDS       25412662//22608085 chr1:10204875-10204876(-) m6A CDS       25412662//24981863//22608085 chr1:10209458-10209459(-) m6A CDS//exon       24981863//25569111//22608085 chr1:10209535-10209536(-) m6A CDS//exon       24981863//25569111//22608085 chr1:10209567-10209568(-) m6A CDS//exon       24981863//25569111//22608085 chr1:10209583-10209584(-) m6A CDS//exon       24981863//25569111//22608085 chr1:10209668-10209669(-) m6A CDS//exon       24981863//25569111 chr1:10209686-10209687(-) m6A CDS//exon       24981863//25569111 chr1:10216533-10216534(-) m6A CDS       24981863//22608085 chr1:10216541-10216542(-) m6A CDS       24981863//22608085 chr1:10232415-10232416(-) m1A CDS       26863196 chr1:10232468-10232469(-) m6A CDS       25412662//24981863//22608085 chr1:10232523-10232524(-) m6A 5'UTR       25683224//25412662//24981863//22608085

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-M44-1
Interactor2: Arfgef1

Evidence Support:

Prediction-Evidence	Rep
Support Database	RepTar