Basic Information:

  VIRBase ID:  

VHID00608730

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-M44-1:  MIMAT0005546          Lpp:  NM_001145952     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-M44-1	Lpp
miRBase Accession/Entrez ID	MIMAT0005546	210126
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	9430020K16Rik//AA959454//AU024130//B130055L10Rik//C79715//D630048H16

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Lpp	chr16:24393362-24393363(+) m6A 5'UTR       25412662//24981863//25569111 chr16:24393437-24393438(+) m6A 5'UTR       25412662//24981863//25569111 chr16:24442855-24442856(+) m6A 5'UTR       25683224//25412662//25569111 chr16:24442886-24442887(+) m6A 5'UTR       25683224//25412662//25569111 chr16:24456838-24456839(+) m6A 5'UTR       25569111//22608085 chr16:24456852-24456853(+) m6A 5'UTR       25569111//22608085 chr16:24661740-24661741(+) m6A CDS       25412662//22608085 chr16:24681766-24681767(+) m6A CDS       25412662//22608085 chr16:24722127-24722128(+) m6A CDS//intron       25683224//25569111 chr16:24761642-24761643(+) m6A CDS       25683224//24981863//25569111 chr16:24761705-24761706(+) m6A CDS       25683224//24981863//25569111 chr16:24761754-24761755(+) m6A CDS       25683224//24981863//25569111 chr16:24761762-24761763(+) m6A CDS       25683224//24981863//25569111 chr16:24761885-24761886(+) m6A CDS       24981863//25569111 chr16:24761942-24761943(+) m6A CDS       25683224//24981863//25569111 chr16:24762002-24762003(+) m6A CDS       25683224//24981863//25569111 chr16:24762056-24762057(+) m6A CDS       25683224//24981863//25569111 chr16:24762184-24762185(+) m6A CDS       25569111 chr16:24762222-24762223(+) m6A CDS       25569111 chr16:24762235-24762236(+) m6A CDS       25569111 chr16:24845158-24845159(+) m6A CDS       25569111 chr16:24845193-24845194(+) m6A CDS       25683224 chr16:24889830-24889831(+) m6A CDS       25683224 chr16:24977232-24977233(+) m6A CDS       25683224//25569111 chr16:24977263-24977264(+) m6A CDS       25683224//25412662//25569111 chr16:24977285-24977286(+) m6A CDS       25683224//25412662//25569111 chr16:24979220-24979221(+) m6A CDS       25683224//25412662//24981863//25569111 chr16:24979248-24979249(+) m6A CDS       25683224//25412662//24981863//25569111 chr16:24979264-24979265(+) m6A CDS       25683224//25412662//24981863//25569111 chr16:24979559-24979560(+) m6A 3'UTR       24981863 chr16:24979615-24979616(+) m6A 3'UTR       24981863 chr16:24982608-24982609(+) m6A 3'UTR       25683224//25569111 chr16:24982640-24982641(+) m6A 3'UTR       25683224//25569111 chr16:24982646-24982647(+) m6A 3'UTR       25683224//25569111 chr16:24982656-24982657(+) m6A 3'UTR       25683224//25569111 chr16:24982754-24982755(+) m6A 3'UTR       25683224 chr16:24983253-24983254(+) m6A 3'UTR       24981863 chr16:24983417-24983418(+) m6A 3'UTR       24981863//25456834 chr16:24983425-24983426(+) m6A 3'UTR       24981863//25456834 chr16:24983445-24983446(+) m6A 3'UTR       24981863//25456834

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Lpp	Exosome Mast cells     17486113

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-M44-1
Interactor2: Lpp

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar