Basic Information:

  VIRBase ID:  

VHID00608682

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-M44-1:  MIMAT0005546          Rfxap:  NM_133231     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-M44-1	Rfxap
miRBase Accession/Entrez ID	MIMAT0005546	170767
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	5730495K23Rik

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Rfxap	chr3:54803742-54803743(-) m6A 3'UTR       24981863//22608085 chr3:54804254-54804255(-) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr3:54804350-54804351(-) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//26404942//22608085//22575960 chr3:54804359-54804360(-) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//26404942//22608085//22575960 chr3:54804367-54804368(-) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//26404942//22608085//22575960 chr3:54804387-54804388(-) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//26404942//22608085//22575960 chr3:54804404-54804405(-) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//26404942//22608085//22575960 chr3:54804494-54804495(-) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr3:54805362-54805363(-) m6A CDS//exon       24981863//25569111 chr3:54805398-54805399(-) m6A CDS//exon       24981863//25569111 chr3:54805427-54805428(-) m6A CDS//exon       24981863//25569111 chr3:54805434-54805435(-) m6A CDS//exon       24981863//25569111 chr3:54805456-54805457(-) m6A CDS//exon       24981863 chr3:54805761-54805762(-) m6A exon//intron       24981863 chr3:54805821-54805822(-) m6A exon//intron       25683224//25412662//24981863//25569111 chr3:54805830-54805831(-) m6A exon//intron       25683224//25412662//24981863//25569111 chr3:54807204-54807205(-) m6A CDS//exon       25683224//25412662//24981863//25569111//22608085 chr3:54807280-54807281(-) m6A CDS//exon       25683224//25412662//24981863//25569111 chr3:54807350-54807351(-) m6A CDS//exon       25683224//25412662//24981863//25569111 chr3:54807377-54807378(-) m6A CDS//exon       25683224//25412662//24981863//25569111 chr3:54807472-54807473(-) m6A CDS       25683224//25412662//24981863//25569111 chr3:54807481-54807482(-) m6A CDS       25683224//25412662//24981863//25569111 chr3:54807694-54807695(-) m6A 5'UTR       25683224//25412662//24981863//25569111

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-M44-1
Interactor2: Rfxap

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar