Basic Information:

  VIRBase ID:  

VHID00608617

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-M44-1:  MIMAT0005546          Slco3a1:  NM_001038643     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-M44-1	Slco3a1
miRBase Accession/Entrez ID	MIMAT0005546	108116
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	5830414C08Rik//A//Anr1//MJA//MJAM//OAT//OATP-D//R75096//Slc21//Slc21a11

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Slco3a1	chr7:74275552-74275553(-) m6A 3'UTR       24981863 chr7:74275650-74275651(-) m6A 3'UTR       24981863//22608085 chr7:74275679-74275680(-) m6A 3'UTR       24981863//22608085 chr7:74275755-74275756(-) m6A 3'UTR       25412662//24981863//25569111//22608085 chr7:74275822-74275823(-) m6A 3'UTR       24981863//25569111 chr7:74275841-74275842(-) m6A 3'UTR       24981863//25569111 chr7:74275931-74275932(-) m6A 3'UTR       24981863 chr7:74276024-74276025(-) m6A CDS       24981863 chr7:74276055-74276056(-) m6A CDS       24981863 chr7:74276064-74276065(-) m6A CDS       24981863 chr7:74276072-74276073(-) m6A CDS       24981863 chr7:74281918-74281919(-) m6A 3'UTR//intron       24981863 chr7:74283389-74283390(-) m6A 3'UTR//intron       24981863 chr7:74283414-74283415(-) m6A 3'UTR//intron       24981863 chr7:74283593-74283594(-) m6A 3'UTR//intron       25412662//24981863//25569111//22608085 chr7:74283643-74283644(-) m6A 3'UTR//intron       25412662//24981863//25569111//22608085 chr7:74283712-74283713(-) m6A 3'UTR//intron       25412662//24981863//25569111//22608085 chr7:74283757-74283758(-) m6A 3'UTR//intron       25412662//24981863//25569111//22608085 chr7:74283810-74283811(-) m6A 3'UTR//intron       24981863//25569111//22608085 chr7:74283834-74283835(-) m6A 3'UTR//intron       24981863//25569111//22608085 chr7:74283889-74283890(-) m6A 3'UTR//intron       25683224//25412662//24981863//25569111//22608085 chr7:74283918-74283919(-) m6A 3'UTR//intron       25683224//25412662//24981863//25569111//22608085 chr7:74283944-74283945(-) m6A 3'UTR//intron       25683224//25412662//24981863//25569111//22608085 chr7:74284041-74284042(-) m6A 3'UTR//intron       25683224//25412662//24981863//25569111//22608085 chr7:74284094-74284095(-) m6A 3'UTR//intron       25683224//25412662//24981863//25569111//22608085 chr7:74284114-74284115(-) m6A 3'UTR//intron       25683224//25412662//24981863//25569111//22608085 chr7:74284167-74284168(-) m6A 3'UTR//intron       25683224//25412662//24981863//25456834//25569111//22608085 chr7:74284255-74284256(-) m6A 3'UTR//intron       25683224//25456834//25412662//24981863//25569111//22608085 chr7:74284270-74284271(-) m6A 3'UTR//intron       25683224//25456834//25412662//24981863//25569111//22608085 chr7:74284308-74284309(-) m6A CDS//intron       25683224//25456834//24981863//25569111//22608085 chr7:74284326-74284327(-) m6A CDS//intron       25683224//25456834//24981863//25569111//22608085 chr7:74284351-74284352(-) m6A CDS//intron       25683224//25456834//24981863//25569111//22608085 chr7:74284360-74284361(-) m6A CDS//intron       25683224//25456834//24981863//25569111//22608085 chr7:74284380-74284381(-) m6A CDS//intron       25683224//25456834//24981863//25569111//22608085//22575960 chr7:74284395-74284396(-) m6A CDS//intron       25683224//25456834//24981863//25569111//22608085//22575960 chr7:74284449-74284450(-) m6A CDS       25456834//24981863//25569111//22608085 chr7:74284470-74284471(-) m6A CDS       25456834//24981863//25569111//22608085 chr7:74284592-74284593(-) m6A CDS       24981863//25569111 chr7:74303146-74303147(-) m6A CDS       25412662//22608085 chr7:74327990-74327991(-) m6A CDS       25412662//22608085 chr7:74331016-74331017(-) m6A exon//intron       25412662 chr7:74346679-74346680(-) m6A CDS//exon       25412662//22608085 chr7:74346696-74346697(-) m6A CDS//exon       25412662//22608085 chr7:74346775-74346776(-) m6A CDS//exon       25412662//22608085 chr7:74346901-74346902(-) m6A CDS//exon       25412662 chr7:74359890-74359891(-) m6A CDS//exon//intron       24981863 chr7:74504193-74504194(-) m6A CDS//exon       25456834//24981863//25569111 chr7:74504301-74504302(-) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr7:74504311-74504312(-) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr7:74504331-74504332(-) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr7:74554505-74554506(-) m1A CDS       26863196 chr7:74554513-74554514(-) m6A CDS       25683224//25412662//24981863//25569111 chr7:74554686-74554687(-) m6A 5'UTR       25683224//25412662//24981863//25569111

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Slco3a1	Nucleus Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-M44-1
Interactor2: Slco3a1

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar