Basic Information:

  VIRBase ID:  

VHID00608531

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-M44-1:  MIMAT0005546          Clmn:  NR_104439     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-M44-1	Clmn
miRBase Accession/Entrez ID	MIMAT0005546	94040
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	9330188N17Rik//AI428889//AI788815//mKIAA1188

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Clmn	chr12:104765907-104765908(-) m6A 3'UTR       24981863//25569111 chr12:104765938-104765939(-) m6A 3'UTR       24981863//25569111 chr12:104766317-104766318(-) Y 3'UTR//exon       26075521 chr12:104766445-104766446(-) m6A 3'UTR       24981863//25569111 chr12:104766538-104766539(-) m6A 3'UTR       24981863//25569111 chr12:104766583-104766584(-) m6A 3'UTR       24981863//25569111 chr12:104766591-104766592(-) m6A 3'UTR       24981863//25569111 chr12:104771761-104771762(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr12:104771766-104771767(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr12:104771789-104771790(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960 chr12:104771921-104771922(-) m6A CDS       24981863//25569111 chr12:104777037-104777038(-) m6A CDS       25456834//24981863//25569111 chr12:104777045-104777046(-) m6A CDS       25456834//24981863//25569111 chr12:104777117-104777118(-) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr12:104777124-104777125(-) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr12:104777132-104777133(-) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr12:104780753-104780754(-) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr12:104780770-104780771(-) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr12:104780796-104780797(-) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr12:104780814-104780815(-) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr12:104780953-104780954(-) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr12:104780968-104780969(-) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr12:104780986-104780987(-) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr12:104780992-104780993(-) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr12:104781120-104781121(-) m6A CDS       25412662//24981863 chr12:104781158-104781159(-) m6A CDS       25412662//24981863 chr12:104781304-104781305(-) m6A CDS       25683224//25412662//24981863 chr12:104781314-104781315(-) m6A CDS       25683224//25412662//24981863//25569111 chr12:104781340-104781341(-) m6A CDS       25683224//25412662//24981863//25569111 chr12:104781348-104781349(-) m6A CDS       25683224//25412662//24981863//25569111 chr12:104781410-104781411(-) m6A CDS       25683224//25412662//24981863//25569111 chr12:104781447-104781448(-) m6A CDS       25683224//25412662//24981863//25569111 chr12:104781488-104781489(-) m6A CDS       25683224//25412662//24981863//25569111 chr12:104781550-104781551(-) m6A CDS       25412662//24981863//25569111 chr12:104781595-104781596(-) m6A CDS       24981863//25569111 chr12:104781604-104781605(-) m6A CDS       24981863//25569111 chr12:104781745-104781746(-) m6A CDS       25683224//24981863//25569111 chr12:104781811-104781812(-) m6A CDS       25683224//25412662//24981863//25569111 chr12:104781846-104781847(-) m6A CDS       25683224//25412662//24981863//25569111 chr12:104781964-104781965(-) m6A CDS       24981863//25569111 chr12:104781994-104781995(-) m6A CDS       24981863//25569111 chr12:104782013-104782014(-) m6A CDS       24981863//25569111 chr12:104782103-104782104(-) m6A CDS       24981863//25569111 chr12:104782165-104782166(-) m6A CDS       25683224//25569111 chr12:104782173-104782174(-) m6A CDS       25683224//25569111 chr12:104782262-104782263(-) m6A CDS       25683224//25412662 chr12:104782381-104782382(-) m6A CDS       25412662//22608085 chr12:104789988-104789989(-) m6A CDS       25412662//22608085 chr12:104790015-104790016(-) m6A CDS       25412662//22608085 chr12:104790035-104790036(-) m6A CDS       25412662//22608085 chr12:104804643-104804644(-) m6A CDS       25569111//22608085 chr12:104864877-104864878(-) m6A CDS       25569111//22608085

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-M44-1
Interactor2: Clmn

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar