Detail Information

Basic Information:


  VIRBase ID:  

VHID00608497

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-M44-1:           Kcnip4:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol mcmv-miR-M44-1 Kcnip4
miRBase
Accession/Entrez ID		 MIMAT0005546 80334
Organism Murid betaherpesvirus 1 Mus musculus
Category miRNA mRNA
Alias - AV032399//Calp//Calp250//KChI//KChIP4//KChIP4a

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR Kcnip4
chr5:49606109(-) A-I      intronic
chr5:49661246(-) A-I      intronic
chr5:49507973(-) A-I      intronic
chr5:49465470(-) A-I      intronic
chr5:49465418(-) A-I      intronic
chr5:49593429(-) A-I      intronic
chr5:49319895(-) A-I      intronic
chr5:49319966(-) A-I      intronic
chr5:49324101(-) A-I      intronic
chr5:49324191(-) A-I      intronic
chr5:49593498(-) A-I      intronic
chr5:49501345(-) A-I      intronic
chr5:49465436(-) A-I      intronic
chr5:49501331(-) A-I      intronic
chr5:49465485(-) A-I      intronic
chr5:49465396(-) A-I      intronic
chr5:49465403(-) A-I      intronic
chr5:49465459(-) A-I      intronic
chr5:49465450(-) A-I      intronic
chr5:49465415(-) A-I      intronic
chr5:49501324(-) A-I      intronic
chr5:49612371(-) A-I      intronic
chr5:49342483(-) A-I      intronic
chr5:49442372(-) A-I      intronic
chr5:49608573(-) A-I      intronic
chr5:49442367(-) A-I      intronic
chr5:49465383(-) A-I      intronic
chr5:49465454(-) A-I      intronic
chr5:49465408(-) A-I      intronic
chr5:49608582(-) A-I      intronic
chr5:49465482(-) A-I      intronic
chr5:49465411(-) A-I      intronic
chr5:49504431(-) A-I      intronic
chr5:49465395(-) A-I      intronic
chr5:49289993(-) A-I      intronic
chr5:49290156(-) A-I      intronic
chr5:49313549(-) A-I      intronic
chr5:49497295(-) A-I      intronic
chr5:49465405(-) A-I      intronic
chr5:49465420(-) A-I      intronic
chr5:49612376(-) A-I      intronic
chr5:49465471(-) A-I      intronic
chr5:49319485(-) A-I      intronic
chr5:49465426(-) A-I      intronic
chr5:49613247(-) A-I      intronic
chr5:49340178(-) A-I      intronic
chr5:49319892(-) A-I      intronic
chr5:49342864(-) A-I      intronic
chr5:49504438(-) A-I      intronic
chr5:49465389(-) A-I      intronic
chr5:49465479(-) A-I      intronic
chr5:49465453(-) A-I      intronic
chr5:49340735(-) A-I      intronic
chr5:49340766(-) A-I      intronic
chr5:49340777(-) A-I      intronic
chr5:49340707(-) A-I      intronic
chr5:49408093(-) A-I      intronic
chr5:49340716(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED Kcnip4
chr5:48948939(-) A-I intron -    22524474
chr5:48951244(-) A-I intron -    22524474
chr5:48951625(-) A-I intron -    22524474
chr5:49051128(-) A-I intron -    22524474
chr5:49051133(-) A-I intron -    22524474
chr5:49074144(-) A-I intron -    22524474
chr5:49074150(-) A-I intron -    22524474
chr5:49074156(-) A-I intron -    22524474
chr5:49074157(-) A-I intron -    22524474
chr5:49074164(-) A-I intron -    22524474
chr5:49074166(-) A-I intron -    22524474
chr5:49074169(-) A-I intron -    22524474
chr5:49074172(-) A-I intron -    22524474
chr5:49074176(-) A-I intron -    22524474
chr5:49074179(-) A-I intron -    22524474
chr5:49074181(-) A-I intron -    22524474
chr5:49074187(-) A-I intron -    22524474
chr5:49074197(-) A-I intron -    22524474
chr5:49074211(-) A-I intron -    22524474
chr5:49074214(-) A-I intron -    22524474
chr5:49074215(-) A-I intron -    22524474
chr5:49074220(-) A-I intron -    22524474
chr5:49074231(-) A-I intron -    22524474
chr5:49074232(-) A-I intron -    22524474
chr5:49074240(-) A-I intron -    22524474
chr5:49074243(-) A-I intron -    22524474
chr5:49074246(-) A-I intron -    22524474
chr5:49106056(-) A-I intron -    22524474
chr5:49110085(-) A-I intron -    22524474
chr5:49110092(-) A-I intron -    22524474
chr5:49110106(-) A-I intron -    22524474
chr5:49113192(-) A-I intron -    22524474
chr5:49113199(-) A-I intron -    22524474
chr5:49217334(-) A-I intron -    22524474
chr5:49217343(-) A-I intron -    22524474
chr5:49221132(-) A-I intron -    22524474
chr5:49221137(-) A-I intron -    22524474
chr5:49222008(-) A-I intron -    22524474

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase Kcnip4
chr5:49524739-49524740(-) m6A 5'UTR       24981863//22608085
chr5:49524769-49524770(-) m6A 5'UTR       24981863//22608085
chr5:49524797-49524798(-) m6A 5'UTR       24981863//22608085

Interaction Network (The top 100 interactions):


Interactor1: mcmv-miR-M44-1
Interactor2: Kcnip4

Evidence Support:


Prediction-Evidence cRep
Support Database RepTar

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