Basic Information:

  VIRBase ID:  

VHID00608263

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-M44-1:  MIMAT0005546          Ubr5:  NM_001081359     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-M44-1	Ubr5
miRBase Accession/Entrez ID	MIMAT0005546	70790
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	Edd//Edd1

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Ubr5	chr15:37968315-37968316(-) m6A CDS       24981863 chr15:37968340-37968341(-) m6A CDS       24981863 chr15:37968352-37968353(-) m6A CDS       24981863 chr15:37968427-37968428(-) m6A CDS       24981863 chr15:37968492-37968493(-) m6A CDS       24981863//22608085 chr15:37970265-37970266(-) m6A CDS       24981863//22608085 chr15:37971827-37971828(-) m6A CDS       24981863//22608085 chr15:37971842-37971843(-) m6A CDS       24981863//22608085 chr15:37972914-37972915(-) m6A CDS       24981863//22608085 chr15:37973010-37973011(-) m6A CDS       22608085 chr15:37973305-37973306(-) m6A CDS       22608085 chr15:37980921-37980922(-) m6A CDS       25412662//24981863//22608085 chr15:37980951-37980952(-) m6A CDS       25412662//24981863//25456834 chr15:37980961-37980962(-) m6A CDS       25412662//24981863//25456834 chr15:37981474-37981475(-) m6A CDS       25412662//24981863//25456834 chr15:37981540-37981541(-) m6A CDS       25683224//25412662//24981863//25456834 chr15:37981555-37981556(-) m6A CDS       25683224//25412662//24981863//25456834//22608085 chr15:37991975-37991976(-) m6A CDS       22608085 chr15:37991985-37991986(-) m6A CDS       22608085 chr15:37992043-37992044(-) m6A CDS       22608085 chr15:37992131-37992132(-) m6A CDS       22608085 chr15:37996687-37996688(-) Y CDS//exon       26075521 chr15:37997017-37997018(-) m6A CDS       24981863//25569111//22608085 chr15:37997028-37997029(-) m6A CDS       24981863//25569111//22608085 chr15:37999917-37999918(-) m6A CDS       25412662//24981863//25456834 chr15:37999956-37999957(-) m6A CDS       25412662//24981863//25456834 chr15:38000657-38000658(-) m6A CDS       25412662//24981863//22608085 chr15:38002254-38002255(-) m6A CDS       24981863//22608085 chr15:38014952-38014953(-) m6A CDS       22608085 chr15:38015002-38015003(-) m6A CDS       22608085 chr15:38015008-38015009(-) m6A CDS       22608085 chr15:38018419-38018420(-) Y CDS//exon       26075521 chr15:38022445-38022446(-) m6A CDS       24981863//22608085 chr15:38022455-38022456(-) m6A CDS       24981863//22608085 chr15:38024750-38024751(-) m6A CDS       24981863//22608085 chr15:38024759-38024760(-) m6A CDS       24981863//22608085 chr15:38041863-38041864(-) m6A CDS       25683224//22608085 chr15:38041878-38041879(-) m6A CDS       25683224//22608085 chr15:38045723-38045724(-) m6A CDS       25683224//25412662//22608085 chr15:38045759-38045760(-) m6A CDS       25683224//25412662//22608085 chr15:38045777-38045778(-) m6A CDS       25683224//25412662//22608085 chr15:38045786-38045787(-) m6A CDS       25683224//22608085 chr15:38045800-38045801(-) m6A CDS       25683224//22608085 chr15:38045805-38045806(-) m6A CDS       25683224//22608085 chr15:38047051-38047052(-) m6A CDS       25683224//22608085 chr15:38047066-38047067(-) m6A CDS       25683224 chr15:38048107-38048108(-) m6A CDS       25569111//22608085 chr15:38048122-38048123(-) m6A CDS       25569111//22608085 chr15:38078378-38078379(-) m6A CDS       25412662//25569111//22608085 chr15:38078540-38078541(-) m6A 5'UTR       25412662//24981863//25569111 chr15:38078597-38078598(-) m6A 5'UTR       25412662//25569111 chr15:38078836-38078837(-) m6A 5'UTR       25683224//25412662//24981863//25456834//25569111

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Ubr5	Nucleus Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-M44-1
Interactor2: Ubr5

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar