Detail Information

Basic Information:


  VIRBase ID:  

VHID00607853

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-M44-1:           Rnf11:      

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Interactor Information:


Interactor1 Interactor2
Symbol mcmv-miR-M44-1 Rnf11
miRBase
Accession/Entrez ID		 MIMAT0005546 29864
Organism Murid betaherpesvirus 1 Mus musculus
Category miRNA mRNA
Alias - -

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR Rnf11
chr4:109126655(-) A-I      3'UTR
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED Rnf11
chr4:109454050(-) C-I exon 3'UTR    22448268

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase Rnf11
chr4:109454006-109454007(-) m6A 3'UTR       25569111//22608085
chr4:109454220-109454221(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//26404942//22608085
chr4:109454258-109454259(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//26404942//22608085//22575960
chr4:109454344-109454345(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//26404942//22608085//22575960
chr4:109454386-109454387(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//26404942//22608085//22575960
chr4:109454401-109454402(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//26404942//22608085//22575960
chr4:109456992-109456993(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960
chr4:109457024-109457025(-) m6A CDS       25456834//25412662//24981863//25569111//22608085
chr4:109457064-109457065(-) m6A CDS       24981863//25569111
chr4:109476224-109476225(-) m6A CDS       25412662//25569111//22608085
chr4:109476289-109476290(-) m6A 5'UTR//intron       25412662//25569111//22608085
chr4:109476331-109476332(-) m6A 5'UTR//intron       25412662//25569111//22608085
chr4:109476894-109476895(-) m6A 5'UTR       25412662//24981863
chr4:109476905-109476906(-) m6A 5'UTR       25412662//24981863
chr4:109476914-109476915(-) m6A 5'UTR       25412662//24981863

Interaction Network (The top 100 interactions):


Interactor1: mcmv-miR-M44-1
Interactor2: Rnf11

Evidence Support:


Prediction-Evidence cRep
Support Database RepTar

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