Basic Information:

  VIRBase ID:  

VHID00607626

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-M44-1:  MIMAT0005546          Rad54l:  NM_001122958     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-M44-1	Rad54l
miRBase Accession/Entrez ID	MIMAT0005546	19366
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	RAD//RAD54

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Rad54l	chr4:116095295-116095296(-) m6A exon       22608085 chr4:116095309-116095310(-) m6A exon       22608085 chr4:116095319-116095320(-) m6A exon       - chr4:116095650-116095651(-) m6A exon       25683224 chr4:116095703-116095704(-) m6A exon       25683224 chr4:116096322-116096323(-) m6A exon       25569111 chr4:116096356-116096357(-) m6A exon       25683224//25412662//25569111 chr4:116096655-116096656(-) m6A exon       25683224//25456834//24981863//25569111 chr4:116096665-116096666(-) m6A exon       25683224//25456834//24981863//25569111 chr4:116096694-116096695(-) m6A exon       25683224//25456834//24981863//25569111 chr4:116096741-116096742(-) m6A exon       25683224//25456834//24981863//25569111 chr4:116096801-116096802(-) m6A exon       25456834//24981863//25569111//22608085 chr4:116096846-116096847(-) m6A exon       25683224//24981863//25456834//25569111//22608085 chr4:116096940-116096941(-) m6A 3'UTR//exon       25683224//25456834//24981863//25569111 chr4:116096954-116096955(-) m6A 3'UTR//exon       25683224//25456834//24981863//25569111 chr4:116097009-116097010(-) m6A 3'UTR//exon       25683224//25456834//24981863//25569111 chr4:116110328-116110329(-) m6A CDS//exon       25683224//25412662//25569111 chr4:116110409-116110410(-) m6A CDS//exon       25683224//25412662//24981863//25569111 chr4:116110488-116110489(-) m6A CDS//intron       24981863//25569111 chr4:116110515-116110516(-) m6A CDS//intron       24981863//25569111

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Rad54l	Nucleus Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-M44-1
Interactor2: Rad54l

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar