Basic Information:

  VIRBase ID:  

VHID00607448

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-M44-1:  MIMAT0005546          Hsp90aa1:  NM_010480     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-M44-1	Hsp90aa1
miRBase Accession/Entrez ID	MIMAT0005546	15519
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	86kDa//89kDa//AL024080//AL024147//hs//Hsp//hsp4//Hsp86-1//Hsp89//Hsp90//Hspca

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Hsp90aa1	chr12:110691135-110691136(-) m6A 3'UTR       - chr12:110691184-110691185(-) m6A 3'UTR       - chr12:110691196-110691197(-) m6A 3'UTR       - chr12:110691277-110691278(-) m6A 3'UTR       22608085 chr12:110691529-110691530(-) m6A 3'UTR       - chr12:110691543-110691544(-) m6A CDS       - chr12:110692155-110692156(-) m6A CDS       22608085 chr12:110692197-110692198(-) m6A CDS       22608085 chr12:110692269-110692270(-) m6A CDS       24981863 chr12:110692306-110692307(-) m6A CDS       24981863 chr12:110692340-110692341(-) m6A CDS       24981863 chr12:110692376-110692377(-) m6A CDS       24981863 chr12:110692383-110692384(-) m6A CDS       24981863 chr12:110692433-110692434(-) m6A CDS       24981863 chr12:110692649-110692650(-) m6A CDS       24981863 chr12:110692662-110692663(-) m6A CDS       24981863 chr12:110692678-110692679(-) m6A CDS       24981863 chr12:110692708-110692709(-) m6A CDS//exon       24981863 chr12:110692714-110692715(-) m6A CDS//exon       24981863 chr12:110692740-110692741(-) m6A CDS//exon       24981863 chr12:110692859-110692860(-) m6A CDS//exon       24981863//22608085 chr12:110692866-110692867(-) m6A CDS//exon       24981863//22608085 chr12:110693045-110693046(-) m6A CDS//exon       24981863//22608085 chr12:110693069-110693070(-) m6A CDS//exon       24981863//22608085 chr12:110693150-110693151(-) m6A CDS//exon       24981863//22608085 chr12:110693351-110693352(-) m6A CDS       22608085 chr12:110693371-110693372(-) m6A CDS       22608085 chr12:110693383-110693384(-) m6A CDS       22608085 chr12:110693673-110693674(-) m6A exon//intron       22608085 chr12:110693781-110693782(-) m6A CDS//exon       25412662//24981863//22608085 chr12:110693796-110693797(-) m6A CDS//exon       25412662//24981863//22608085 chr12:110693858-110693859(-) m6A CDS//exon       25412662//24981863 chr12:110694037-110694038(-) m6A CDS//exon       25412662//24981863//25569111 chr12:110694126-110694127(-) m6A CDS//exon       25683224//25412662//24981863//25456834//25569111//22608085 chr12:110694136-110694137(-) m6A CDS//exon       25683224//25412662//24981863//25456834//25569111//22608085 chr12:110694168-110694169(-) m1A CDS//exon       26863196 chr12:110694195-110694196(-) m1A CDS//exon       26863196 chr12:110694209-110694210(-) m1A CDS//exon       26863196 chr12:110694241-110694242(-) m6A CDS//exon       25683224//25412662//24981863//25456834//25569111//22608085 chr12:110694650-110694651(-) m6A CDS//exon       25683224//25412662//24981863//25569111//22608085 chr12:110694655-110694656(-) m6A CDS//exon       25683224//25412662//24981863//25569111//22608085 chr12:110694683-110694684(-) m6A CDS//exon       25683224//25412662//24981863//25569111//22608085 chr12:110694699-110694700(-) m6A CDS//exon       25683224//25412662//24981863//25569111//22608085 chr12:110695060-110695061(-) m6A CDS//exon       25683224//25412662//24981863//25569111 chr12:110695318-110695319(-) m6A CDS//exon       24981863//25569111//22608085 chr12:110695323-110695324(-) m6A CDS//exon       24981863//25569111//22608085 chr12:110695328-110695329(-) m6A CDS//exon       24981863//25569111//22608085 chr12:110695368-110695369(-) m6A CDS//exon       24981863//25569111//22608085 chr12:110695373-110695374(-) m6A CDS//exon       24981863//25569111//22608085 chr12:110695383-110695384(-) m6A CDS//exon       24981863//25569111//22608085 chr12:110695561-110695562(-) m6A CDS//exon       24981863//25569111 chr12:110695625-110695626(-) m6A CDS//exon       24981863//25569111 chr12:110695654-110695655(-) m6A CDS//exon       24981863//25569111 chr12:110695661-110695662(-) m6A CDS//exon       24981863//25569111 chr12:110695667-110695668(-) m6A CDS//exon       24981863//25569111 chr12:110695757-110695758(-) m6A 5'UTR//intron       24981863//25569111 chr12:110696230-110696231(-) m6A 5'UTR//intron       24981863//25569111

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Hsp90aa1	Cytosolic polysome Murine plasmacytoma cells (J558)     12923260 ER-bound polysome Murine plasmacytoma cells (J558)     12923260 Exosome Mast cells     17486113 Perinuclear NIH-3T3 fibroblasts     12923260

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-M44-1
Interactor2: Hsp90aa1

Evidence Support:

Prediction-Evidence	Rep
Support Database	RepTar