Basic Information:

  VIRBase ID:  

VHID00607436

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-M44-1:  MIMAT0005546          Foxa1:  NM_008259     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-M44-1	Foxa1
miRBase Accession/Entrez ID	MIMAT0005546	15375
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	Hnf//Hnf-//Hnf-3a//Hnf3a//Tcf-3//Tcf-3a//Tcf3//Tcf3a

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Foxa1	chr12:57542197-57542198(-) m6A CDS       25456834//24981863//25569111//22575960 chr12:57542437-57542438(-) m6A CDS       25683224//25456834//24981863//25569111//22575960 chr12:57542444-57542445(-) m6A CDS       25683224//25456834//24981863//25569111//22575960 chr12:57542539-57542540(-) m6A CDS       25456834//24981863//25569111//22575960 chr12:57542557-57542558(-) m6A CDS       25456834//24981863//25569111//22575960 chr12:57542686-57542687(-) m6A CDS       25683224//25456834//24981863//22575960 chr12:57542725-57542726(-) m6A CDS       25683224//25456834//24981863//22575960 chr12:57542785-57542786(-) m6A CDS       25683224//25456834//24981863//25569111//22575960 chr12:57542803-57542804(-) m6A CDS       25683224//25456834//24981863//25569111//22575960 chr12:57542827-57542828(-) m6A CDS       25683224//25456834//24981863//25569111//22575960 chr12:57542951-57542952(-) m6A CDS       25456834//24981863//25569111//22575960 chr12:57543028-57543029(-) m6A CDS       25412662//24981863//25569111//22575960 chr12:57543151-57543152(-) m6A CDS       25456834//24981863//25569111//22575960 chr12:57543280-57543281(-) m6A CDS       25456834//24981863 chr12:57543298-57543299(-) m6A CDS       25683224//25456834//24981863 chr12:57543307-57543308(-) m6A CDS       25683224//25456834//24981863 chr12:57543328-57543329(-) m6A CDS       25683224 chr12:57545673-57545674(-) m6A CDS       25683224 chr12:57545688-57545689(-) m6A CDS       25683224 chr12:57545725-57545726(-) m6A CDS       25683224

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-M44-1
Interactor2: Foxa1

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar