Basic Information:

  VIRBase ID:  

VHID00607192

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-M44-1:  MIMAT0005546          Gm5113:  NR_157376     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-M44-1	Gm5113
miRBase Accession/Entrez ID	MIMAT0005546	330503
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	lncRNA
Alias	-	B430201F14//EG330503

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	Gm5113	chr7:30965069(+) A-I      3'UTR

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	Gm5113	chr7:30180050(+) A-I intron -    22524474

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Gm5113	chr7:30170006-30170007(+) m6A 5'UTR//exon       25569111//22608085 chr7:30170058-30170059(+) m6A 5'UTR//exon       25569111 chr7:30170074-30170075(+) m6A 5'UTR//exon       25569111 chr7:30170108-30170109(+) m6A 5'UTR//exon       25569111 chr7:30170162-30170163(+) m6A 5'UTR//exon       25569111 chr7:30177651-30177652(+) m6A 5'UTR//exon       25412662//24981863 chr7:30177744-30177745(+) m6A 5'UTR//exon       25412662//24981863//25569111 chr7:30177777-30177778(+) m6A 5'UTR//exon       25412662//24981863//25569111 chr7:30177790-30177791(+) m6A 5'UTR//exon       25412662//24981863//25569111 chr7:30177830-30177831(+) m6A 5'UTR//exon       25683224//25412662//24981863//25569111 chr7:30177886-30177887(+) m6A 5'UTR//exon       25683224//25456834//25412662//24981863//25569111 chr7:30178108-30178109(+) m6A 5'UTR//exon       25683224//25456834//24981863//25569111//22608085//22575960 chr7:30178127-30178128(+) m6A 5'UTR//exon       25683224//25456834//24981863//25569111//22608085//22575960 chr7:30178145-30178146(+) m6A 5'UTR//exon       25683224//25456834//24981863//25569111//22608085//22575960 chr7:30178162-30178163(+) m6A 5'UTR//exon       25683224//25456834//24981863//25569111//22608085//22575960 chr7:30178173-30178174(+) m6A 5'UTR//exon       25683224//25456834//24981863//25569111//22608085//22575960 chr7:30178212-30178213(+) m6A 5'UTR//exon       25683224//25456834//24981863//25569111//22608085//22575960 chr7:30178246-30178247(+) m6A 5'UTR//exon       25683224//25456834//24981863//25569111//22608085//22575960 chr7:30178329-30178330(+) m6A 5'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr7:30178412-30178413(+) m6A 5'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr7:30178479-30178480(+) m6A 5'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr7:30178515-30178516(+) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr7:30178570-30178571(+) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr7:30178587-30178588(+) m6A CDS//exon       25683224//25456834//24981863//25569111//22608085 chr7:30178771-30178772(+) m6A CDS//exon       25456834//24981863//25569111//22608085 chr7:30178798-30178799(+) m6A CDS//exon       25456834//24981863//25569111//22608085 chr7:30178886-30178887(+) Y CDS//exon       26075521 chr7:30178978-30178979(+) m6A 3'UTR//exon       24981863 chr7:30180275-30180276(+) m6A exon       25456834//24981863//22608085 chr7:30180285-30180286(+) m6A exon       25456834//24981863//22608085 chr7:30180291-30180292(+) m6A exon       25456834//24981863//22608085 chr7:30180307-30180308(+) m6A exon       25456834//24981863//22608085 chr7:30180314-30180315(+) m6A exon       25456834//24981863//22608085 chr7:30180326-30180327(+) m6A exon       25456834//24981863//22608085 chr7:30180332-30180333(+) m6A exon       25456834//24981863//22608085 chr7:30180370-30180371(+) m6A exon       25456834//24981863//22608085 chr7:30180436-30180437(+) m6A exon       25456834//24981863//22608085 chr7:30181211-30181212(+) m6A exon       24981863 chr7:30181264-30181265(+) m6A exon       24981863

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-M44-1
Interactor2: Gm5113

Evidence Support:

Prediction-Evidence	Rep
Support Database	RepTar