Basic Information:

  VIRBase ID:  

VHID00607128

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-M23-2-3p:  MIMAT0005545          Arhgap27:  NM_183288     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-M23-2-3p	Arhgap27
miRBase Accession/Entrez ID	MIMAT0005545	544817
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	2310069I04Rik//5730442P18Rik//Gm21552//Sh3d2//Sh3d20

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Arhgap27	chr11:103332288-103332289(-) m6A 3'UTR//exon       25683224//25456834//24981863 chr11:103332364-103332365(-) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//22608085 chr11:103332448-103332449(-) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr11:103332519-103332520(-) m6A 3'UTR//exon       25683224//25456834//24981863//25569111 chr11:103332824-103332825(-) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr11:103332855-103332856(-) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr11:103332881-103332882(-) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr11:103332917-103332918(-) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr11:103332979-103332980(-) m6A CDS//exon       25683224//25456834//24981863//25569111//22608085 chr11:103333016-103333017(-) m6A CDS//exon       25683224//25456834//24981863//25569111 chr11:103333183-103333184(-) m6A CDS//exon       25569111 chr11:103333283-103333284(-) m6A exon//intron       - chr11:103333390-103333391(-) m6A CDS//exon       - chr11:103334355-103334356(-) m6A CDS//exon       25412662 chr11:103339223-103339224(-) m6A CDS//exon       24981863 chr11:103339259-103339260(-) m6A CDS//exon       24981863 chr11:103339494-103339495(-) m6A CDS//exon       24981863 chr11:103339581-103339582(-) m6A CDS//exon       24981863 chr11:103339621-103339622(-) m6A CDS//exon       24981863 chr11:103339666-103339667(-) m6A exon//intron       25412662//24981863 chr11:103339673-103339674(-) m6A exon//intron       25412662//24981863 chr11:103339703-103339704(-) m6A exon//intron       25412662//24981863 chr11:103340035-103340036(-) m6A 5'UTR//CDS//exon       25412662//24981863 chr11:103340064-103340065(-) m6A 5'UTR//CDS//exon       25412662//24981863 chr11:103340151-103340152(-) m6A 5'UTR//CDS//exon       25412662//24981863 chr11:103340217-103340218(-) m6A 5'UTR//CDS//exon       24981863//25412662 chr11:103340288-103340289(-) m6A 5'UTR//CDS//exon       24981863 chr11:103340298-103340299(-) m6A 5'UTR//CDS//exon       24981863 chr11:103340386-103340387(-) m6A 5'UTR//CDS//exon       24981863 chr11:103344545-103344546(-) m6A CDS//intron       24981863 chr11:103344576-103344577(-) m6A 5'UTR//intron       24981863 chr11:103360283-103360284(-) m6A CDS//exon       25683224//24981863//25412662//25569111 chr11:103360630-103360631(-) m6A CDS//exon       25683224//25412662//24981863 chr11:103360858-103360859(-) m6A CDS//exon       24981863//25412662 chr11:103363304-103363305(-) m6A 5'UTR//exon       25412662 chr11:103363325-103363326(-) m6A 5'UTR//exon       25412662 chr11:103363374-103363375(-) m6A 5'UTR//exon       24981863//25412662//25569111 chr11:103363381-103363382(-) m6A 5'UTR//exon       24981863//25412662//25569111

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-M23-2-3p
Interactor2: Arhgap27

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar