Detail Information

Basic Information:


  VIRBase ID:  

VHID00607124

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-M23-2-3p:           Zdhhc18:      

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Interactor Information:


Interactor1 Interactor2
Symbol mcmv-miR-M23-2-3p Zdhhc18
miRBase
Accession/Entrez ID		 MIMAT0005545 503610
Organism Murid betaherpesvirus 1 Mus musculus
Category miRNA mRNA
Alias - DHHC-18

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR Zdhhc18
chr4:133172238(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED Zdhhc18
chr4:133616323(-) A-I intron -    22524474

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase Zdhhc18
chr4:133607587-133607588(-) m6A 3'UTR       25412662
chr4:133607622-133607623(-) m6A 3'UTR       25412662
chr4:133607675-133607676(-) m6A 3'UTR       25412662
chr4:133608007-133608008(-) m6A 3'UTR       24981863//25569111
chr4:133608077-133608078(-) m6A 3'UTR       24981863//25569111
chr4:133608099-133608100(-) m6A 3'UTR       24981863//25569111
chr4:133608248-133608249(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22575960
chr4:133608260-133608261(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22575960
chr4:133608280-133608281(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22575960
chr4:133608319-133608320(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960
chr4:133608355-133608356(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22575960
chr4:133608378-133608379(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22575960
chr4:133608409-133608410(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22575960
chr4:133608497-133608498(-) m6A 3'UTR       25683224//25456834//24981863//25569111
chr4:133608529-133608530(-) m6A 3'UTR       25683224//25456834//24981863//25569111
chr4:133608617-133608618(-) m6A 3'UTR       25683224//24981863
chr4:133627271-133627272(-) m6A CDS       25456834
chr4:133633381-133633382(-) m6A CDS//intron       25412662//25569111

Interaction Network (The top 100 interactions):


Interactor1: mcmv-miR-M23-2-3p
Interactor2: Zdhhc18

Evidence Support:


Prediction-Evidence cRep//Rep
Support Database RepTar

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