Basic Information:

  VIRBase ID:  

VHID00607123

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-M23-2-3p:  MIMAT0005545          Cbx6:  NM_028763     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-M23-2-3p	Cbx6
miRBase Accession/Entrez ID	MIMAT0005545	494448
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	-

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Cbx6	chr15:79823937-79823938(-) m6A 3'UTR       25683224//24981863//25569111//22608085 chr15:79824082-79824083(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr15:79824124-79824125(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr15:79824146-79824147(-) m6A 3'UTR       25456834//24981863//25569111//22608085 chr15:79824174-79824175(-) m6A 3'UTR       25456834//24981863//25569111//22608085 chr15:79824326-79824327(-) m6A 3'UTR       25683224//24981863//26404942 chr15:79824391-79824392(-) m6A 3'UTR       25683224//25412662//24981863//25569111//26404942 chr15:79824488-79824489(-) m6A 3'UTR       25412662//24981863//25569111//22608085 chr15:79824576-79824577(-) m6A 3'UTR       25412662//25569111//22608085 chr15:79824899-79824900(-) m6A 3'UTR       25683224//25412662//24981863//25569111 chr15:79824913-79824914(-) m6A 3'UTR       25683224//25412662//24981863//25569111 chr15:79824933-79824934(-) m6A 3'UTR       25683224//25412662//24981863//25569111//22608085 chr15:79824956-79824957(-) m6A 3'UTR       25683224//25412662//24981863//25569111//26404942//22608085 chr15:79825148-79825149(-) m6A 3'UTR       25683224//25412662//22608085 chr15:79825256-79825257(-) m6A 3'UTR       25683224//22608085 chr15:79825444-79825445(-) m6A 3'UTR       25412662//24981863//25569111//22608085 chr15:79826045-79826046(-) m6A 3'UTR       24981863//25456834//22608085 chr15:79826056-79826057(-) m6A 3'UTR       25683224//24981863//25456834//22608085 chr15:79826731-79826732(-) m6A 3'UTR       25412662//25569111//22608085 chr15:79826765-79826766(-) m6A 3'UTR       25412662//22608085 chr15:79826792-79826793(-) m6A 3'UTR       25412662//22608085 chr15:79826838-79826839(-) m6A 3'UTR       25412662//22608085 chr15:79826922-79826923(-) m6A 3'UTR       25683224//25412662//24981863//25569111//22608085 chr15:79826992-79826993(-) m6A 3'UTR       25683224//25412662//24981863//25569111 chr15:79827181-79827182(-) m6A 3'UTR       25683224//22608085 chr15:79827295-79827296(-) m6A 3'UTR       25683224//22608085 chr15:79827308-79827309(-) m6A 3'UTR       25683224//22608085 chr15:79827342-79827343(-) m6A 3'UTR       25683224//22608085 chr15:79827378-79827379(-) m6A 3'UTR       25683224//22608085 chr15:79827711-79827712(-) m6A 3'UTR       25683224//24981863//25569111//22608085 chr15:79827826-79827827(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr15:79827897-79827898(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr15:79828148-79828149(-) m6A 3'UTR//CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr15:79828211-79828212(-) m6A 3'UTR//CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr15:79828326-79828327(-) m6A 3'UTR//CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr15:79828607-79828608(-) m6A CDS//intron       25683224//25456834//25412662//24981863//25569111//22608085 chr15:79828694-79828695(-) m6A CDS//exon//intron       25683224//25456834//25412662//24981863//25569111//22608085 chr15:79828709-79828710(-) m6A CDS//exon//intron       25683224//25456834//25412662//24981863//25569111//22608085 chr15:79828758-79828759(-) m6A CDS//exon//intron       25683224//25456834//25412662//24981863//25569111//22608085 chr15:79828811-79828812(-) m6A CDS//exon//intron       25683224//25456834//25412662//24981863//25569111//22608085 chr15:79828859-79828860(-) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111 chr15:79832575-79832576(-) m6A exon//intron       25683224//25412662//24981863//25569111 chr15:79832590-79832591(-) m6A exon//intron       25683224//25412662//24981863//25569111 chr15:79832662-79832663(-) m6A exon//intron       25412662//24981863 chr15:79832751-79832752(-) m6A exon//intron       25412662 chr15:79833278-79833279(-) m6A exon//intron       25412662 chr15:79833285-79833286(-) m6A exon//intron       25412662 chr15:79833432-79833433(-) m6A exon//intron       25412662 chr15:79833525-79833526(-) m6A CDS//exon//intron       25683224//25412662//24981863//25569111//22608085 chr15:79833532-79833533(-) m6A CDS//exon//intron       25683224//25412662//24981863//25569111//22608085 chr15:79833538-79833539(-) m6A CDS//exon//intron       25683224//25412662//24981863//25569111//22608085 chr15:79833740-79833741(-) m6A CDS//exon       25683224//25412662//24981863//25569111//22608085 chr15:79834470-79834471(-) m6A 5'UTR       25412662 chr15:79834485-79834486(-) m6A 5'UTR       25412662 chr15:79834554-79834555(-) m6A 5'UTR       25412662

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Cbx6	Cytoplasm Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-M23-2-3p
Interactor2: Cbx6

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar