Basic Information:

  VIRBase ID:  

VHID00607109

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-M23-2-3p:  MIMAT0005545          Tmem178b:  NM_001004182     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-M23-2-3p	Tmem178b
miRBase Accession/Entrez ID	MIMAT0005545	434008
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	A930009E05Rik//EG434008//Gm5567

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Tmem178b	chr6:39873287-39873288(+) m6A 5'UTR       24981863 chr6:39873303-39873304(+) m6A 5'UTR       24981863 chr6:40004204-40004205(+) m6A CDS       24981863//22608085 chr6:40004227-40004228(+) m6A CDS       24981863//22608085 chr6:40100730-40100731(+) m6A intron       22608085 chr6:40207485-40207486(+) m6A CDS       22608085 chr6:40245523-40245524(+) m6A CDS//intron       22608085 chr6:40245603-40245604(+) m6A CDS//intron       24981863//22608085 chr6:40245727-40245728(+) m6A CDS//intron       24981863//22608085 chr6:40245747-40245748(+) m6A CDS//intron       24981863//22608085 chr6:40245760-40245761(+) m6A CDS//intron       24981863//22608085 chr6:40245775-40245776(+) m6A 3'UTR//intron       24981863//22608085 chr6:40245783-40245784(+) m6A 3'UTR//intron       24981863//22608085 chr6:40245838-40245839(+) m6A 3'UTR//intron       24981863//22608085 chr6:40245904-40245905(+) m6A 3'UTR//intron       24981863//22608085 chr6:40245997-40245998(+) m6A 3'UTR//intron       24981863//22608085 chr6:40246067-40246068(+) m6A 3'UTR//intron       24981863//22608085 chr6:40246137-40246138(+) m6A 3'UTR//intron       24981863//22608085 chr6:40246174-40246175(+) m6A 3'UTR//intron       24981863//22608085 chr6:40246228-40246229(+) m6A 3'UTR//intron       24981863//22608085 chr6:40246300-40246301(+) m6A 3'UTR//intron       24981863//22608085 chr6:40246335-40246336(+) m6A 3'UTR//intron       24981863//22608085 chr6:40246408-40246409(+) m6A 3'UTR//intron       24981863//22608085 chr6:40246431-40246432(+) m6A 3'UTR//intron       24981863//22608085 chr6:40246469-40246470(+) m6A 3'UTR//intron       24981863//22608085 chr6:40246687-40246688(+) m6A 3'UTR//intron       24981863//22608085 chr6:40246736-40246737(+) m6A 3'UTR//intron       24981863//22608085 chr6:40246805-40246806(+) m6A 3'UTR//intron       25683224//24981863//22608085 chr6:40246897-40246898(+) m6A 3'UTR//intron       24981863//26404942 chr6:40246962-40246963(+) m6A 3'UTR//intron       24981863//26404942 chr6:40246969-40246970(+) m6A 3'UTR//intron       24981863//26404942 chr6:40246974-40246975(+) m6A 3'UTR//intron       24981863//26404942 chr6:40246990-40246991(+) m6A 3'UTR//intron       24981863 chr6:40247021-40247022(+) m6A 3'UTR//intron       24981863//22608085 chr6:40247061-40247062(+) m6A 3'UTR//intron       24981863//22608085 chr6:40247101-40247102(+) m6A 3'UTR//intron       24981863//22608085 chr6:40247166-40247167(+) m6A 3'UTR//intron       24981863//22608085 chr6:40247171-40247172(+) m6A 3'UTR//intron       24981863//22608085 chr6:40247333-40247334(+) m6A 3'UTR//intron       24981863//22608085 chr6:40247425-40247426(+) m6A 3'UTR//intron       24981863//22608085 chr6:40247442-40247443(+) m6A 3'UTR//intron       24981863//22608085 chr6:40247546-40247547(+) m6A 3'UTR//intron       24981863//22608085 chr6:40247568-40247569(+) m6A 3'UTR//intron       24981863//22608085 chr6:40248413-40248414(+) m6A 3'UTR//intron       24981863//26404942//22608085 chr6:40248433-40248434(+) m6A 3'UTR//intron       24981863//26404942//22608085 chr6:40250437-40250438(+) m6A exon//intron       24981863//22608085 chr6:40250458-40250459(+) m6A exon//intron       24981863//22608085 chr6:40250481-40250482(+) m6A exon//intron       24981863//22608085 chr6:40250489-40250490(+) m6A exon//intron       24981863//22608085 chr6:40250528-40250529(+) m6A exon//intron       24981863//22608085 chr6:40250548-40250549(+) m6A exon//intron       24981863//22608085 chr6:40250556-40250557(+) m6A exon//intron       24981863//22608085 chr6:40250586-40250587(+) m6A exon//intron       24981863//22608085 chr6:40250623-40250624(+) m6A exon//intron       24981863//22608085 chr6:40250671-40250672(+) m6A exon//intron       24981863//22608085 chr6:40252567-40252568(+) m6A exon//intron       24981863//22608085 chr6:40252595-40252596(+) m6A exon//intron       24981863//22608085 chr6:40254811-40254812(+) m6A CDS//exon       24981863//26404942//22608085 chr6:40254824-40254825(+) m6A CDS//exon       24981863//26404942//22608085 chr6:40254847-40254848(+) m6A CDS//exon       24981863//26404942//22608085 chr6:40254912-40254913(+) m6A CDS//exon       24981863//26404942//22608085 chr6:40254942-40254943(+) m6A CDS//exon       24981863//25456834//26404942//22608085 chr6:40254953-40254954(+) m6A 3'UTR//exon       24981863//25456834//26404942//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Tmem178b	Cell body Cerebellar Purkinje cells     18184812

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-M23-2-3p
Interactor2: Tmem178b

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar