Detail Information

Basic Information:


  VIRBase ID:  

VHID00607048

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-M23-2-3p:           Prmt8:      

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Interactor Information:


Interactor1 Interactor2
Symbol mcmv-miR-M23-2-3p Prmt8
miRBase
Accession/Entrez ID
MIMAT0005545 381813
Organism Murid betaherpesvirus 1 Mus musculus
Category miRNA mRNA
Alias - Hrmt1//Hrmt1l3//Hrmt1l4

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase Prmt8
chr6:127689461-127689462(-) m6A 3'UTR       24981863
chr6:127689469-127689470(-) m6A 3'UTR       24981863
chr6:127689488-127689489(-) m6A 3'UTR       24981863
chr6:127689497-127689498(-) m6A 3'UTR       24981863
chr6:127689535-127689536(-) m6A 3'UTR       24981863
chr6:127689695-127689696(-) m6A 3'UTR       24981863//25456834//22608085
chr6:127689739-127689740(-) m6A 3'UTR       25456834//24981863//22608085
chr6:127689856-127689857(-) m6A CDS       25683224//25456834//24981863//22608085
chr6:127689869-127689870(-) m6A CDS       25683224//25456834//24981863//22608085
chr6:127689885-127689886(-) m6A CDS       25456834//24981863//22608085
chr6:127689903-127689904(-) m6A CDS       25456834//24981863//22608085
chr6:127711203-127711204(-) m6A CDS       22608085
chr6:127711226-127711227(-) m6A CDS       22608085
chr6:127711791-127711792(-) m6A CDS       22608085
chr6:127711866-127711867(-) m6A CDS       22608085
chr6:127726529-127726530(-) m6A CDS       22608085
chr6:127729524-127729525(-) m6A CDS       22608085
chr6:127729540-127729541(-) m6A CDS       22608085
chr6:127768735-127768736(-) m6A CDS       24981863//22608085
chr6:127768762-127768763(-) m6A 5'UTR       25456834//24981863//25569111//22608085
chr6:127768903-127768904(-) m6A 5'UTR       25683224//25456834//24981863//25569111//22608085
chr6:127768926-127768927(-) m6A 5'UTR       25683224//25456834//24981863//25569111//22608085
chr6:127768978-127768979(-) m6A 5'UTR       25683224//25456834//24981863//25569111//22608085
chr6:127769089-127769090(-) m6A 5'UTR       25683224//25456834//24981863//25569111

Interaction Network (The top 100 interactions):


Interactor1: mcmv-miR-M23-2-3p
Interactor2: Prmt8

Evidence Support:


Prediction-Evidence Rep
Support Database RepTar

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