Basic Information:

  VIRBase ID:  

VHID00607026

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-M23-2-3p:  MIMAT0005545          Nckap5l:  NM_001001884     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-M23-2-3p	Nckap5l
miRBase Accession/Entrez ID	MIMAT0005545	380969
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	C230021P08Rik//Cep169

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Nckap5l	chr15:99422270-99422271(-) m6A 3'UTR       25683224//25569111 chr15:99422449-99422450(-) m6A 3'UTR       25683224//25412662//24981863//25456834//25569111 chr15:99422500-99422501(-) m6A 3'UTR       25683224//25412662//24981863//25456834//25569111 chr15:99422593-99422594(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr15:99422661-99422662(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111 chr15:99422694-99422695(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111 chr15:99422760-99422761(-) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr15:99422810-99422811(-) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr15:99422887-99422888(-) m6A CDS       25683224//25412662//24981863//25569111 chr15:99422894-99422895(-) m6A CDS       25683224//25412662//24981863//25569111 chr15:99423143-99423144(-) m6A CDS       25683224//25412662//24981863//25569111 chr15:99423153-99423154(-) m6A CDS       25683224//25412662//24981863//25569111 chr15:99423206-99423207(-) m6A CDS       25683224//25412662//24981863//25569111 chr15:99423224-99423225(-) m6A CDS       25683224//25412662//25569111 chr15:99423229-99423230(-) m6A CDS       25683224//25412662//25569111 chr15:99423265-99423266(-) m6A CDS       25683224//25412662//25569111 chr15:99423377-99423378(-) m6A CDS       25683224//25412662//25569111 chr15:99423414-99423415(-) m6A CDS       25683224//25412662//25569111 chr15:99423575-99423576(-) m6A CDS       25683224//25412662//24981863//25569111 chr15:99423599-99423600(-) m6A CDS       25683224//25412662//24981863//25569111 chr15:99423632-99423633(-) m6A CDS       25683224//25412662//24981863//25569111 chr15:99423646-99423647(-) m6A CDS       25683224//25412662 chr15:99423653-99423654(-) m6A CDS       25683224//25412662 chr15:99423990-99423991(-) m6A CDS       25683224//25412662 chr15:99424126-99424127(-) m6A CDS//exon       25412662 chr15:99425555-99425556(-) m6A CDS       25412662 chr15:99425579-99425580(-) m6A CDS       25412662//25569111 chr15:99425714-99425715(-) m6A CDS       25683224//25412662//24981863//25569111 chr15:99425825-99425826(-) m6A CDS       25683224//25412662//24981863//25569111//22608085 chr15:99425849-99425850(-) m6A CDS       25683224//25412662//24981863//25569111//22608085 chr15:99425914-99425915(-) m6A CDS       25683224//25412662//24981863//25569111 chr15:99425934-99425935(-) m6A CDS       25683224//25412662//24981863//25569111 chr15:99426223-99426224(-) m6A CDS       25683224//25412662//24981863//25569111 chr15:99426356-99426357(-) m6A CDS       25683224//25412662//24981863//25569111 chr15:99426412-99426413(-) m6A CDS       25683224//25412662//24981863//25569111 chr15:99426418-99426419(-) m6A CDS       25683224//25412662//24981863//25569111 chr15:99426496-99426497(-) m6A CDS       25683224//25412662//24981863//25569111 chr15:99426618-99426619(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr15:99426625-99426626(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr15:99426647-99426648(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr15:99426726-99426727(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr15:99426764-99426765(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr15:99426852-99426853(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr15:99426913-99426914(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr15:99426950-99426951(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr15:99426959-99426960(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr15:99426985-99426986(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr15:99427024-99427025(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr15:99427040-99427041(-) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr15:99427294-99427295(-) m6A CDS       25683224//25412662//25569111 chr15:99427534-99427535(-) m6A CDS       25683224//25456834//24981863//25569111 chr15:99427550-99427551(-) m6A CDS       25683224//25456834//24981863//25569111 chr15:99427623-99427624(-) m6A CDS       25683224//25456834//24981863//25569111 chr15:99427631-99427632(-) m6A CDS       25683224//25456834//24981863//25569111 chr15:99427660-99427661(-) m6A CDS       25683224//25456834//24981863//25569111 chr15:99427712-99427713(-) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr15:99427924-99427925(-) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr15:99427993-99427994(-) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr15:99428030-99428031(-) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr15:99429374-99429375(-) m6A CDS       25683224//25412662//24981863//25569111 chr15:99429398-99429399(-) m6A CDS       25683224//25412662//24981863//25569111 chr15:99432734-99432735(-) m6A CDS       25412662//24981863 chr15:99432800-99432801(-) m6A CDS       25412662 chr15:99433451-99433452(-) m6A CDS       25683224 chr15:99433592-99433593(-) m6A CDS       25683224//25569111 chr15:99433603-99433604(-) m6A CDS       25683224//25569111 chr15:99433630-99433631(-) m6A CDS       25683224//25412662//25569111 chr15:99434145-99434146(-) m6A CDS       25683224//25412662//25569111 chr15:99436030-99436031(-) m6A 5'UTR//intron       25683224//25412662 chr15:99436036-99436037(-) m6A 5'UTR//intron       25683224//25412662 chr15:99457662-99457663(-) m6A 5'UTR       25683224//25412662 chr15:99457671-99457672(-) m6A 5'UTR       25683224//25412662

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-M23-2-3p
Interactor2: Nckap5l

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar