Basic Information:

  VIRBase ID:  

VHID00606983

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-M23-2-3p:  MIMAT0005545          Opcml:  NM_177906     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-M23-2-3p	Opcml
miRBase Accession/Entrez ID	MIMAT0005545	330908
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	2900075O15Rik//3732419F12//AI844366//B930023M13Rik//C230027C17//Gm181//Obc//Obcam

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	Opcml	chr9:27865685(+) A-I      intronic chr9:27988824(+) A-I      intronic chr9:27988813(+) A-I      intronic chr9:27988704(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	Opcml	chr9:28058100(+) A-I intron -    22524474

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Opcml	chr9:27791270-27791271(+) m6A 5'UTR//intron       24981863 chr9:27791283-27791284(+) m6A 5'UTR//intron       24981863 chr9:28403592-28403593(+) m6A exon//intron       24981863//22608085 chr9:28403617-28403618(+) m6A exon//intron       24981863//22608085 chr9:28403640-28403641(+) m6A exon//intron       25683224//24981863//22608085 chr9:28403674-28403675(+) m6A exon//intron       25683224//24981863//22608085 chr9:28403705-28403706(+) m6A exon//intron       25683224//24981863//22608085 chr9:28403734-28403735(+) m6A exon//intron       24981863//22608085 chr9:28403755-28403756(+) m6A exon//intron       24981863//22608085 chr9:28403792-28403793(+) m6A exon//intron       24981863//22608085 chr9:28403825-28403826(+) m6A 5'UTR//exon//intron       24981863//22608085 chr9:28403849-28403850(+) m6A 5'UTR//exon//intron       24981863//22608085 chr9:28403863-28403864(+) m6A 5'UTR//exon//intron       24981863//22608085 chr9:28404103-28404104(+) m6A 5'UTR//exon//intron       24981863//22608085 chr9:28404196-28404197(+) m6A 5'UTR//exon//intron       25683224//24981863//22608085 chr9:28404202-28404203(+) m6A 5'UTR//exon//intron       25683224//24981863//22608085 chr9:28404372-28404373(+) m6A CDS//exon       25683224//24981863 chr9:28813304-28813305(+) m6A CDS//exon       25683224//22608085 chr9:28813316-28813317(+) m6A CDS//exon       25683224//22608085 chr9:28813371-28813372(+) m6A CDS//exon       25683224//22608085 chr9:28813377-28813378(+) m6A CDS//exon       25683224//22608085 chr9:28901560-28901561(+) m6A CDS       25683224//22608085 chr9:28901650-28901651(+) m6A CDS       25683224//22608085 chr9:28902081-28902082(+) m6A CDS       25683224//22608085 chr9:28903249-28903250(+) m6A CDS       25683224//22608085 chr9:28903306-28903307(+) m6A CDS       25683224//24981863//22608085 chr9:28903327-28903328(+) m6A CDS       25683224//24981863//22608085 chr9:28903339-28903340(+) m6A CDS       25683224//24981863//22608085 chr9:28920113-28920114(+) m6A CDS       25683224//24981863//22608085 chr9:28920154-28920155(+) m6A CDS       25683224//24981863//22608085 chr9:28920193-28920194(+) m6A 3'UTR       25683224//24981863 chr9:28920235-28920236(+) m6A 3'UTR       25683224//24981863 chr9:28920261-28920262(+) m6A 3'UTR       25683224//24981863 chr9:28921328-28921329(+) m6A 3'UTR       24981863 chr9:28921384-28921385(+) m6A 3'UTR       25683224//24981863 chr9:28921393-28921394(+) m6A 3'UTR       25683224//24981863 chr9:28921401-28921402(+) m6A 3'UTR       25683224//24981863 chr9:28921589-28921590(+) m6A 3'UTR       24981863//22608085 chr9:28921599-28921600(+) m6A 3'UTR       24981863//22608085 chr9:28921633-28921634(+) m6A 3'UTR       24981863//22608085 chr9:28921700-28921701(+) m6A 3'UTR       24981863//22608085 chr9:28921925-28921926(+) m6A 3'UTR       25683224//24981863//26404942//22608085 chr9:28922107-28922108(+) m6A 3'UTR       25683224//24981863//26404942//22608085 chr9:28922140-28922141(+) m6A 3'UTR       25683224//24981863//26404942//22608085 chr9:28922191-28922192(+) m6A 3'UTR       25683224//24981863//26404942//22608085 chr9:28922213-28922214(+) m6A 3'UTR       25683224//24981863//26404942//22608085 chr9:28922238-28922239(+) m6A 3'UTR       25683224//24981863//26404942//22608085 chr9:28922346-28922347(+) m6A 3'UTR       25683224//24981863//26404942//22608085 chr9:28922359-28922360(+) m6A 3'UTR       25683224//24981863//26404942//22608085 chr9:28922489-28922490(+) m6A 3'UTR       25683224//24981863//26404942//22608085 chr9:28922528-28922529(+) m6A 3'UTR       25683224//24981863//26404942//22608085 chr9:28922557-28922558(+) m6A 3'UTR       25683224//24981863//26404942//22608085 chr9:28922692-28922693(+) m6A 3'UTR       25683224//24981863//26404942//22608085 chr9:28922698-28922699(+) m6A 3'UTR       25683224//24981863//26404942//22608085 chr9:28922770-28922771(+) m6A 3'UTR       25683224//24981863//26404942//22608085 chr9:28922806-28922807(+) m6A 3'UTR       25683224//24981863//26404942//22608085 chr9:28922853-28922854(+) m6A 3'UTR       25683224//24981863//26404942//22608085 chr9:28922870-28922871(+) m6A 3'UTR       25683224//24981863//26404942//22608085 chr9:28922952-28922953(+) m6A 3'UTR       25683224//24981863//26404942//22608085 chr9:28922965-28922966(+) m6A 3'UTR       25683224//24981863//26404942//22608085 chr9:28923141-28923142(+) m6A 3'UTR       25683224//24981863//26404942//22608085 chr9:28923161-28923162(+) m6A 3'UTR       25683224//24981863//26404942//22608085 chr9:28923211-28923212(+) m6A 3'UTR       25683224//24981863//26404942//22608085 chr9:28923228-28923229(+) m6A 3'UTR       25683224//24981863//26404942//22608085 chr9:28923692-28923693(+) m6A 3'UTR       25683224//22608085 chr9:28924034-28924035(+) m6A 3'UTR       25683224//24981863//26404942//22608085 chr9:28924041-28924042(+) m6A 3'UTR       25683224//24981863//26404942//22608085 chr9:28924086-28924087(+) m6A 3'UTR       24981863//22608085 chr9:28924509-28924510(+) m6A 3'UTR       24981863 chr9:28924581-28924582(+) m6A 3'UTR       25683224//24981863//26404942//22608085 chr9:28924623-28924624(+) m6A 3'UTR       25683224//24981863//26404942//22608085 chr9:28924680-28924681(+) m6A 3'UTR       25683224//24981863//26404942//22608085 chr9:28924725-28924726(+) m6A 3'UTR       24981863//26404942 chr9:28924751-28924752(+) m6A 3'UTR       24981863//26404942 chr9:28924943-28924944(+) m6A 3'UTR       26404942//22608085 chr9:28925057-28925058(+) m6A 3'UTR       26404942

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-M23-2-3p
Interactor2: Opcml

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar