Basic Information:

  VIRBase ID:  

VHID00606981

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-M23-2-3p:  MIMAT0005545          Hapln4:  NM_177900     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-M23-2-3p	Hapln4
miRBase Accession/Entrez ID	MIMAT0005545	330790
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	9330174O11//Br//Bral2//Lpr4

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Hapln4	chr8:70083498-70083499(+) m6A 5'UTR//exon       25412662//24981863 chr8:70084280-70084281(+) m6A exon//intron       25412662 chr8:70084472-70084473(+) m6A CDS//exon//intron       25412662 chr8:70084931-70084932(+) m6A CDS       25683224 chr8:70085010-70085011(+) m6A CDS       25412662//25569111 chr8:70085025-70085026(+) m6A CDS       25412662//25569111 chr8:70085069-70085070(+) m6A CDS       25412662//25569111 chr8:70086883-70086884(+) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr8:70086942-70086943(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr8:70087019-70087020(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr8:70088148-70088149(+) m6A CDS       25412662//25569111 chr8:70088258-70088259(+) m6A CDS       25412662//24981863//25569111 chr8:70088320-70088321(+) m6A CDS       25412662//24981863//25569111 chr8:70088503-70088504(+) m6A CDS       25456834//25412662//24981863//25569111//22608085 chr8:70088621-70088622(+) m6A 3'UTR       25683224//25456834//24981863//25412662//25569111//22608085//22575960 chr8:70088652-70088653(+) m6A 3'UTR       25683224//25456834//24981863//25412662//25569111//22608085//22575960 chr8:70088679-70088680(+) m6A 3'UTR       25683224//25456834//24981863//25412662//25569111//22608085//22575960 chr8:70088822-70088823(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr8:70088861-70088862(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr8:70088871-70088872(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr8:70088880-70088881(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr8:70088903-70088904(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr8:70088925-70088926(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr8:70088933-70088934(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr8:70088961-70088962(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr8:70088981-70088982(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr8:70088993-70088994(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr8:70089021-70089022(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr8:70089071-70089072(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr8:70089078-70089079(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr8:70089196-70089197(+) m6A 3'UTR       25456834//24981863//25569111//22608085 chr8:70089249-70089250(+) m6A 3'UTR       25456834//24981863//25569111//22608085 chr8:70089296-70089297(+) m6A 3'UTR       25456834//24981863//25569111//22608085 chr8:70089357-70089358(+) m6A 3'UTR       25456834//24981863//25569111//22608085 chr8:70089364-70089365(+) m6A 3'UTR       25456834//24981863//25569111//22608085 chr8:70089389-70089390(+) m6A 3'UTR       25456834//24981863//25569111//22608085 chr8:70089574-70089575(+) m6A 3'UTR       24981863//25569111 chr8:70089586-70089587(+) m6A 3'UTR       24981863//25569111 chr8:70089715-70089716(+) m6A 3'UTR       24981863//25569111 chr8:70089881-70089882(+) m6A 3'UTR       25456834//24981863//25569111//22608085 chr8:70089972-70089973(+) m6A 3'UTR       25456834//24981863//25569111//22608085 chr8:70089986-70089987(+) m6A 3'UTR       25456834//24981863//25569111//22608085 chr8:70090092-70090093(+) m6A 3'UTR       24981863//25569111//22608085 chr8:70090100-70090101(+) m6A 3'UTR       24981863//25569111//22608085 chr8:70090172-70090173(+) m6A 3'UTR       24981863//25569111 chr8:70090199-70090200(+) m6A 3'UTR       24981863//25569111 chr8:70090223-70090224(+) m6A 3'UTR       24981863//25569111 chr8:70090267-70090268(+) m6A 3'UTR       24981863//25569111

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-M23-2-3p
Interactor2: Hapln4

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar