Detail Information

Basic Information:


  VIRBase ID:  

VHID00606954

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-M23-2-3p:           Nol4l:      

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Interactor Information:


Interactor1 Interactor2
Symbol mcmv-miR-M23-2-3p Nol4l
miRBase
Accession/Entrez ID		 MIMAT0005545 329540
Organism Murid betaherpesvirus 1 Mus musculus
Category miRNA mRNA
Alias - 4931410H15//8430427H17Rik//AI429157//Gm1636

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase Nol4l
chr2:153407986-153407987(-) m6A 3'UTR       25683224
chr2:153408024-153408025(-) m6A 3'UTR       25683224
chr2:153408291-153408292(-) m6A 3'UTR       24981863
chr2:153408307-153408308(-) m6A 3'UTR       24981863
chr2:153408313-153408314(-) m6A 3'UTR       24981863
chr2:153408346-153408347(-) m6A 3'UTR       24981863
chr2:153408351-153408352(-) m6A 3'UTR       24981863
chr2:153408794-153408795(-) m6A 3'UTR       25683224//24981863//25456834//26404942
chr2:153408803-153408804(-) m6A 3'UTR       25683224//24981863//25456834//26404942
chr2:153408810-153408811(-) m6A 3'UTR       25683224//24981863//25456834//26404942
chr2:153408871-153408872(-) m6A 3'UTR       25683224//24981863//25456834//26404942
chr2:153408917-153408918(-) m6A 3'UTR       25683224//24981863//26404942
chr2:153408936-153408937(-) m6A 3'UTR       25683224//24981863//26404942
chr2:153409847-153409848(-) m6A 3'UTR       24981863
chr2:153409874-153409875(-) m6A 3'UTR       24981863
chr2:153409885-153409886(-) m6A 3'UTR       24981863
chr2:153411217-153411218(-) m6A 3'UTR       24981863
chr2:153411292-153411293(-) m6A 3'UTR       25683224//24981863//22608085
chr2:153411306-153411307(-) m6A 3'UTR       25683224//24981863//25456834//22608085
chr2:153411454-153411455(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085
chr2:153411469-153411470(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085
chr2:153411561-153411562(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085
chr2:153411615-153411616(-) m6A CDS       25683224//25456834//24981863//25569111//22608085
chr2:153411633-153411634(-) m6A CDS       25683224//25456834//24981863//25569111//22608085
chr2:153411641-153411642(-) m6A CDS       25683224//25456834//24981863//25569111//22608085
chr2:153411745-153411746(-) m6A CDS       25683224//25456834//24981863//25569111//22608085
chr2:153411819-153411820(-) m6A CDS       25683224//24981863//25569111
chr2:153416661-153416662(-) m6A CDS       25683224//24981863//25569111
chr2:153416750-153416751(-) m6A CDS       25683224//24981863
chr2:153416807-153416808(-) m6A CDS       24981863
chr2:153416839-153416840(-) m6A CDS       24981863
chr2:153417844-153417845(-) m6A CDS//exon       25683224//25412662
chr2:153417850-153417851(-) m6A CDS//exon       25683224//25412662
chr2:153417984-153417985(-) m6A CDS//exon       25683224//25412662
chr2:153418017-153418018(-) m6A CDS//exon       25683224
chr2:153418080-153418081(-) m6A CDS//exon       25683224
chr2:153418105-153418106(-) m6A CDS//exon       25683224
chr2:153420541-153420542(-) m6A CDS//intron       25683224
chr2:153420661-153420662(-) m6A CDS//exon       25683224//25412662
chr2:153420682-153420683(-) m6A CDS//exon       25683224//25412662
chr2:153420730-153420731(-) m6A CDS//exon       25683224//25412662
chr2:153420760-153420761(-) m6A CDS//exon       25683224//25412662
chr2:153436225-153436226(-) m6A CDS//exon       25683224//25412662
chr2:153436321-153436322(-) m6A 5'UTR//CDS//exon       25683224//25412662
chr2:153445517-153445518(-) m6A exon//intron       25683224//25412662
chr2:153477972-153477973(-) m6A CDS//exon       25683224
chr2:153529486-153529487(-) m6A CDS       25683224//24981863
chr2:153529578-153529579(-) m6A CDS       25683224//25456834//24981863//25569111
chr2:153529635-153529636(-) m6A CDS       25456834//24981863//25569111
chr2:153529641-153529642(-) m6A CDS       25456834//24981863//25569111
chr2:153529676-153529677(-) m6A CDS       25456834//24981863//25569111
chr2:153529703-153529704(-) m6A CDS       25456834//24981863//25569111
chr2:153529873-153529874(-) m6A 5'UTR       25569111

Interaction Network (The top 100 interactions):


Interactor1: mcmv-miR-M23-2-3p
Interactor2: Nol4l

Evidence Support:


Prediction-Evidence cRep//Rep
Support Database RepTar

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