Basic Information:

  VIRBase ID:  

VHID00606924

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-M23-2-3p:  MIMAT0005545          Arl4c:  NM_177305     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-M23-2-3p	Arl4c
miRBase Accession/Entrez ID	MIMAT0005545	320982
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	A//A630084M22Rik//Arl7//LAK

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Arl4c	chr1:88674637-88674638(-) m6A 3'UTR       24981863//25569111 chr1:88674699-88674700(-) m6A 3'UTR       25683224//25412662//24981863//25569111//22608085 chr1:88699809-88699810(-) m6A 3'UTR//intron       24981863 chr1:88699847-88699848(-) m6A 3'UTR//intron       24981863 chr1:88699888-88699889(-) m6A 3'UTR//intron       24981863 chr1:88699899-88699900(-) m6A 3'UTR//intron       24981863 chr1:88699915-88699916(-) m6A 3'UTR//intron       24981863 chr1:88700198-88700199(-) m6A 3'UTR//intron       25456834//24981863//25569111 chr1:88700206-88700207(-) m6A 3'UTR//intron       25456834//24981863//25569111 chr1:88700213-88700214(-) m6A 3'UTR//intron       25456834//24981863//25569111 chr1:88700222-88700223(-) m6A 3'UTR//intron       25456834//24981863//25569111 chr1:88700278-88700279(-) m6A 3'UTR//intron       25683224//25456834//24981863//25569111 chr1:88700301-88700302(-) m6A 3'UTR//intron       25683224//25456834//25412662//24981863//25569111 chr1:88700366-88700367(-) m6A 3'UTR//intron       25683224//25456834//25412662//24981863//25569111//22608085 chr1:88700407-88700408(-) m6A 3'UTR//intron       25683224//25456834//25412662//24981863//25569111//22608085 chr1:88700417-88700418(-) m6A 3'UTR//intron       25683224//25456834//25412662//24981863//25569111//22608085 chr1:88700513-88700514(-) m6A 3'UTR//intron       25683224//25456834//25412662//24981863//25569111//22608085 chr1:88700610-88700611(-) m6A 3'UTR//intron       25683224//25456834//25412662//24981863//25569111//22608085 chr1:88700676-88700677(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr1:88700719-88700720(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr1:88700801-88700802(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr1:88700849-88700850(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr1:88700923-88700924(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr1:88700931-88700932(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr1:88700957-88700958(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr1:88700984-88700985(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr1:88700991-88700992(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr1:88700997-88700998(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr1:88701005-88701006(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr1:88701146-88701147(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr1:88701314-88701315(-) m6A CDS       25683224//25412662//24981863//25569111 chr1:88701368-88701369(-) m6A CDS       25683224//25412662//24981863//25569111 chr1:88701505-88701506(-) m6A CDS       25683224//24981863//25569111//26404942 chr1:88701545-88701546(-) m6A CDS       25683224//24981863//25569111//26404942 chr1:88701585-88701586(-) m6A CDS       25683224//24981863//25569111//26404942 chr1:88701599-88701600(-) m6A CDS       25683224//24981863//25569111 chr1:88701790-88701791(-) m6A 5'UTR       25412662//24981863//25569111 chr1:88701896-88701897(-) m6A 5'UTR       25412662//24981863//25569111 chr1:88701939-88701940(-) m6A 5'UTR       25683224//25412662//24981863//25569111 chr1:88702009-88702010(-) m6A 5'UTR       25683224//25412662//24981863//25569111 chr1:88702117-88702118(-) m6A 5'UTR       25683224//25456834//25412662//24981863//25569111 chr1:88702201-88702202(-) m6A 5'UTR       25456834//25412662//24981863//25569111

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-M23-2-3p
Interactor2: Arl4c

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar