Basic Information:

  VIRBase ID:  

VHID00606905

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-M23-2-3p:  MIMAT0005545          Ubn2:  NM_177185     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-M23-2-3p	Ubn2
miRBase Accession/Entrez ID	MIMAT0005545	320538
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	2900060J04Rik//6030408G03Rik//BC060116//D130059P03Rik//mKIAA2030

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	Ubn2	chr6:38386436(+) A-I      intronic chr6:38386435(+) A-I      intronic chr6:38404087(+) A-I      intronic chr6:38404029(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	Ubn2	chr6:38436435(+) A-I intron -    22524474 chr6:38436436(+) A-I intron -    22524474 chr6:38454029(+) A-I intron -    22524474 chr6:38454087(+) A-I intron -    22524474

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Ubn2	chr6:38434017-38434018(+) m6A 5'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr6:38434050-38434051(+) m6A 5'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr6:38434163-38434164(+) m6A 5'UTR       25683224//25412662//24981863//25569111 chr6:38434445-38434446(+) m6A CDS       25683224//25412662//24981863//25569111 chr6:38434533-38434534(+) m6A CDS       25683224//25412662//24981863//25569111 chr6:38434591-38434592(+) m6A CDS       25683224//25412662//24981863//25569111 chr6:38440459-38440460(+) m6A CDS       25683224//25412662//24981863//25569111 chr6:38452886-38452887(+) m6A CDS       25683224 chr6:38452941-38452942(+) m6A CDS       25569111//22608085 chr6:38461562-38461563(+) m6A CDS       24981863 chr6:38462826-38462827(+) m6A exon//intron       24981863 chr6:38462872-38462873(+) m6A exon//intron       24981863 chr6:38462883-38462884(+) m6A exon//intron       24981863 chr6:38463759-38463760(+) m6A CDS//exon       25683224//25456834//24981863//25569111//22608085 chr6:38463771-38463772(+) m6A CDS//exon       25683224//25456834//24981863//25569111//22608085 chr6:38463786-38463787(+) m6A CDS//exon       25683224//25456834//24981863//25569111//22608085 chr6:38463814-38463815(+) m6A CDS//exon       25683224//25456834//24981863//25569111//22608085 chr6:38463820-38463821(+) m6A CDS//exon       25683224//25456834//24981863//25569111//22608085 chr6:38464032-38464033(+) m6A CDS//exon       24981863 chr6:38481888-38481889(+) m6A CDS//exon       25412662//22608085 chr6:38482559-38482560(+) m6A CDS//exon       25683224//25412662//25569111//22608085 chr6:38490402-38490403(+) m6A CDS//exon       25683224//25412662//25569111//22608085 chr6:38490509-38490510(+) m6A CDS//exon       25683224//25412662//24981863//25569111//22608085 chr6:38490540-38490541(+) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr6:38490606-38490607(+) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr6:38490652-38490653(+) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr6:38490664-38490665(+) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr6:38490724-38490725(+) m6A CDS//exon       25683224//25456834//24981863//25569111//22608085 chr6:38490740-38490741(+) m6A CDS//exon       25683224//25456834//24981863//25569111//22608085 chr6:38490793-38490794(+) m6A CDS//exon       25683224//25456834//24981863//25569111//22608085 chr6:38490855-38490856(+) m6A CDS//exon       25683224//25456834//24981863//25569111//22608085 chr6:38490874-38490875(+) m6A CDS//exon       25683224//25456834//24981863//25569111//22608085 chr6:38490904-38490905(+) m6A CDS//exon       25683224//25456834//24981863//25569111//22608085 chr6:38490947-38490948(+) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr6:38491001-38491002(+) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr6:38491074-38491075(+) m6A CDS//exon       25683224//25456834//24981863//25569111//22608085 chr6:38491115-38491116(+) m6A CDS//exon       25456834//24981863//25569111//22608085 chr6:38491178-38491179(+) m6A CDS//exon       25456834//24981863//25569111//22608085 chr6:38491268-38491269(+) m6A CDS//exon       24981863//25569111//22608085 chr6:38491375-38491376(+) m6A CDS//exon       24981863//25569111//22608085 chr6:38491393-38491394(+) m6A CDS//exon       24981863//25569111//22608085 chr6:38491483-38491484(+) m6A CDS//exon       25456834//24981863//25569111//22608085 chr6:38491545-38491546(+) m6A CDS//exon       25456834//24981863//25569111//22608085 chr6:38491597-38491598(+) m6A CDS//exon       25683224//25456834//24981863//25569111//22608085 chr6:38491614-38491615(+) m6A CDS//exon       25683224//25456834//24981863//25569111//22608085 chr6:38491624-38491625(+) m6A CDS//exon       25683224//25456834//24981863//25569111//22608085 chr6:38491685-38491686(+) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr6:38491705-38491706(+) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr6:38491713-38491714(+) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr6:38491730-38491731(+) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr6:38491743-38491744(+) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr6:38491817-38491818(+) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr6:38491835-38491836(+) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr6:38491847-38491848(+) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr6:38491864-38491865(+) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr6:38491885-38491886(+) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr6:38498765-38498766(+) m6A CDS//exon//intron       25683224//25456834//25412662//24981863//25569111//22608085 chr6:38498853-38498854(+) m6A CDS//exon//intron       25683224//25412662//24981863//25456834//25569111 chr6:38502258-38502259(+) m6A CDS//exon//intron       25683224//25456834//24981863//25569111 chr6:38502277-38502278(+) m6A CDS//exon//intron       25683224//25456834//24981863//25569111//22608085 chr6:38502309-38502310(+) m6A 3'UTR//exon//intron       25683224//25456834//24981863//25412662//25569111//22608085 chr6:38502330-38502331(+) m6A 3'UTR//exon//intron       25683224//25456834//24981863//25412662//25569111 chr6:38502503-38502504(+) m6A 3'UTR//exon//intron       25683224//25456834//24981863//25569111//22608085 chr6:38502536-38502537(+) m6A 3'UTR//exon//intron       25683224//25456834//24981863//25569111//22608085 chr6:38502549-38502550(+) m6A 3'UTR//exon//intron       25683224//25456834//24981863//25569111//22608085 chr6:38502628-38502629(+) m6A 3'UTR//intron       25683224//25456834//24981863//25569111//22608085 chr6:38502697-38502698(+) m6A 3'UTR//intron       25683224//25456834//24981863//25569111//22608085 chr6:38502759-38502760(+) m6A 3'UTR//intron       25683224//25456834//24981863//25569111//22608085 chr6:38502782-38502783(+) m6A 3'UTR//intron       25683224//24981863//25569111//22608085 chr6:38502819-38502820(+) m6A 3'UTR//intron       25683224//25569111 chr6:38502861-38502862(+) m6A 3'UTR//intron       25683224//25569111 chr6:38503232-38503233(+) m6A 3'UTR//intron       25683224//25569111 chr6:38503239-38503240(+) m6A 3'UTR//intron       25683224//25569111 chr6:38503310-38503311(+) m6A 3'UTR//intron       25683224//24981863//25569111 chr6:38503348-38503349(+) m6A 3'UTR//intron       25683224//24981863//25569111 chr6:38503373-38503374(+) m6A 3'UTR//intron       25683224//24981863//25569111 chr6:38506148-38506149(+) m6A 3'UTR//intron       25683224//24981863 chr6:38506190-38506191(+) m6A 3'UTR//intron       25683224//24981863 chr6:38506245-38506246(+) m6A 3'UTR//intron       25683224//24981863 chr6:38506397-38506398(+) m6A 3'UTR//intron       24981863 chr6:38506739-38506740(+) m6A 3'UTR//intron       22608085 chr6:38510602-38510603(+) Y 3'UTR//exon//intron       26075521 chr6:38511163-38511164(+) m6A 3'UTR//intron       22608085 chr6:38511211-38511212(+) m6A 3'UTR//intron       22608085 chr6:38511244-38511245(+) m6A 3'UTR//intron       22608085 chr6:38511446-38511447(+) m6A 3'UTR//intron       22608085 chr6:38511458-38511459(+) m6A 3'UTR//intron       22608085 chr6:38511465-38511466(+) m6A 3'UTR//intron       22608085 chr6:38511551-38511552(+) m6A 3'UTR//intron       22608085 chr6:38522311-38522312(+) m6A 3'UTR//CDS       25569111 chr6:38522327-38522328(+) m6A 3'UTR//CDS       25569111 chr6:38522332-38522333(+) m6A 3'UTR//CDS       25569111 chr6:38522400-38522401(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr6:38522432-38522433(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr6:38522465-38522466(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr6:38522507-38522508(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr6:38522531-38522532(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr6:38522559-38522560(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr6:38522567-38522568(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr6:38522590-38522591(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr6:38522616-38522617(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr6:38522643-38522644(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr6:38522742-38522743(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr6:38522846-38522847(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr6:38522890-38522891(+) m6A 3'UTR       25683224//25412662//24981863//25569111//22608085 chr6:38522897-38522898(+) m6A 3'UTR       25683224//25412662//24981863//25569111//22608085 chr6:38523002-38523003(+) m6A 3'UTR       25683224//25412662//24981863//25569111//22608085 chr6:38523012-38523013(+) m6A 3'UTR       25683224//25412662//24981863//25569111//22608085 chr6:38523077-38523078(+) m6A 3'UTR       25683224//25412662//24981863//25569111//22608085 chr6:38523197-38523198(+) m6A 3'UTR       25456834//24981863//25569111 chr6:38523218-38523219(+) m6A 3'UTR       25456834//24981863//25569111 chr6:38523409-38523410(+) m6A 3'UTR       25569111 chr6:38523467-38523468(+) m6A 3'UTR       25683224//24981863//25569111 chr6:38523477-38523478(+) m6A 3'UTR       25683224//24981863//25569111//22608085 chr6:38523514-38523515(+) m6A 3'UTR       25683224//24981863//25456834//25569111//22608085 chr6:38523523-38523524(+) m6A 3'UTR       25683224//24981863//25456834//25569111//22608085

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-M23-2-3p
Interactor2: Ubn2

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar