Basic Information:

  VIRBase ID:  

VHID00606332

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-M23-2-3p:  MIMAT0005545          Gmps:  NM_001033300     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-M23-2-3p	Gmps
miRBase Accession/Entrez ID	MIMAT0005545	229363
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	670032//AA591640//AI047208//Gm9479

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Gmps	chr3:63990577-63990578(+) m6A CDS       25412662//22608085 chr3:63993222-63993223(+) m6A CDS       25412662//22608085 chr3:63993250-63993251(+) m6A CDS       25412662//24981863 chr3:63993255-63993256(+) m6A CDS       25412662//24981863 chr3:63993279-63993280(+) m6A CDS       25412662//24981863 chr3:63993918-63993919(+) m6A CDS       25412662 chr3:63993928-63993929(+) m6A CDS       25412662 chr3:63993948-63993949(+) m6A CDS       25412662//22608085 chr3:64017331-64017332(+) m6A 3'UTR       24981863//22608085 chr3:64019491-64019492(+) m6A 3'UTR       24981863 chr3:64019579-64019580(+) m6A 3'UTR       24981863 chr3:64019586-64019587(+) m6A 3'UTR       24981863 chr3:64019608-64019609(+) m6A 3'UTR       24981863//22608085 chr3:64019675-64019676(+) m6A 3'UTR       25456834//24981863//25569111//22608085 chr3:64019709-64019710(+) m6A 3'UTR       25456834//24981863//25569111//22608085 chr3:64019741-64019742(+) m6A 3'UTR       25456834//24981863//25569111//22608085 chr3:64019748-64019749(+) m6A 3'UTR       25456834//24981863//25569111//22608085 chr3:64019754-64019755(+) m6A 3'UTR       25456834//24981863//25569111//22608085 chr3:64019782-64019783(+) m6A 3'UTR       25456834//24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Gmps	Nucleus Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-M23-2-3p
Interactor2: Gmps

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar