Basic Information:

  VIRBase ID:  

VHID00606310

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-M23-2-3p:  MIMAT0005545          Itpka:  NM_146125     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-M23-2-3p	Itpka
miRBase Accession/Entrez ID	MIMAT0005545	228550
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	-

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Itpka	chr2:119742569-119742570(+) m6A CDS       25683224//25412662 chr2:119742673-119742674(+) m6A CDS       25683224//25412662//22608085 chr2:119742685-119742686(+) m6A CDS       25683224//25412662//22608085 chr2:119742778-119742779(+) m6A CDS       25683224//25412662//24981863//22608085 chr2:119742840-119742841(+) m6A CDS       25683224//25412662//24981863//22608085 chr2:119750738-119750739(+) m6A CDS       25683224//25412662//24981863 chr2:119750826-119750827(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr2:119750906-119750907(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr2:119750954-119750955(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr2:119750960-119750961(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr2:119750996-119750997(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr2:119751099-119751100(+) m6A 3'UTR       24981863//25569111//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Itpka	Soma Cerebellar Purkinje cells     18184812

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-M23-2-3p
Interactor2: Itpka

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar