Detail Information

Basic Information:


  VIRBase ID:  

VHID00606002

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-M23-2-3p:           Satb2:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol mcmv-miR-M23-2-3p Satb2
miRBase
Accession/Entrez ID		 MIMAT0005545 212712
Organism Murid betaherpesvirus 1 Mus musculus
Category miRNA mRNA
Alias - BAP0//BAP002//mKIAA1034

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase Satb2
chr1:56794159-56794160(-) m6A 3'UTR       24981863
chr1:56794234-56794235(-) m6A 3'UTR       24981863
chr1:56794705-56794706(-) m6A 3'UTR       24981863//26404942
chr1:56794743-56794744(-) m6A 3'UTR       24981863//26404942
chr1:56794801-56794802(-) m6A 3'UTR       24981863//26404942
chr1:56794850-56794851(-) m6A 3'UTR       24981863//26404942
chr1:56795070-56795071(-) m6A 3'UTR       24981863
chr1:56795083-56795084(-) m6A 3'UTR       24981863
chr1:56795100-56795101(-) m6A 3'UTR       24981863
chr1:56795147-56795148(-) m6A 3'UTR       24981863
chr1:56795208-56795209(-) m6A 3'UTR       24981863
chr1:56795235-56795236(-) m6A 3'UTR       24981863
chr1:56795364-56795365(-) m6A 3'UTR       24981863
chr1:56795417-56795418(-) m6A 3'UTR       24981863
chr1:56795427-56795428(-) m6A 3'UTR       24981863
chr1:56795465-56795466(-) m6A 3'UTR       24981863
chr1:56795837-56795838(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085
chr1:56795882-56795883(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085
chr1:56795983-56795984(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085
chr1:56795989-56795990(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085
chr1:56796008-56796009(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085
chr1:56796025-56796026(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085
chr1:56796036-56796037(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085
chr1:56796088-56796089(-) m6A 3'UTR       24981863//25456834//25569111//22608085
chr1:56796257-56796258(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085
chr1:56796297-56796298(-) m6A 3'UTR       25683224//25456834//24981863//25569111//26404942//22608085
chr1:56796315-56796316(-) m6A 3'UTR       25683224//25456834//24981863//25569111//26404942//22608085
chr1:56796342-56796343(-) m6A 3'UTR       25683224//25456834//24981863//25569111//26404942//22608085
chr1:56796347-56796348(-) m6A 3'UTR       25683224//25456834//24981863//25569111//26404942//22608085
chr1:56796364-56796365(-) m6A 3'UTR       25683224//25456834//24981863//25569111//26404942//22608085
chr1:56796371-56796372(-) m6A 3'UTR       25683224//25456834//24981863//25569111//26404942//22608085
chr1:56796460-56796461(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085
chr1:56796564-56796565(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085
chr1:56796578-56796579(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085
chr1:56796624-56796625(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085
chr1:56796743-56796744(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085
chr1:56796776-56796777(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085
chr1:56796796-56796797(-) m6A CDS       25683224//25456834//24981863//25569111//22608085
chr1:56796990-56796991(-) m6A CDS       25683224//25456834//24981863//25569111
chr1:56797016-56797017(-) m6A CDS       25683224//24981863//25569111
chr1:56797158-56797159(-) m6A CDS       25683224//25412662//25569111
chr1:56871462-56871463(-) m6A CDS       24981863
chr1:56871531-56871532(-) m6A CDS       24981863//25569111
chr1:56871633-56871634(-) m6A CDS       24981863//25569111//22608085
chr1:56871677-56871678(-) m6A CDS       25456834//24981863//25569111//22608085
chr1:56871685-56871686(-) m6A CDS       25456834//24981863//25569111//22608085
chr1:56871708-56871709(-) m6A CDS       25456834//24981863//25569111//22608085
chr1:56871753-56871754(-) m6A CDS       25456834//24981863//25569111//22608085
chr1:56871762-56871763(-) m6A CDS       25456834//24981863//25569111//22608085
chr1:56897982-56897983(-) m6A CDS//intron       25683224
chr1:56897999-56898000(-) m6A CDS//intron       25683224
chr1:56898030-56898031(-) m6A CDS//intron       25683224
chr1:56898051-56898052(-) m6A CDS//intron       25683224
chr1:56969786-56969787(-) m6A CDS       25412662
chr1:56969844-56969845(-) m6A 5'UTR       25412662//24981863//25569111
chr1:56971124-56971125(-) m6A 5'UTR//intron       25412662//24981863//25456834//25569111
chr1:56971151-56971152(-) m6A 5'UTR//intron       25456834//25412662//24981863//25569111
chr1:56971187-56971188(-) m6A 5'UTR//intron       25456834//25412662//24981863//25569111
chr1:56971209-56971210(-) m6A 5'UTR//intron       25456834//25412662//24981863//25569111
chr1:56971215-56971216(-) m6A 5'UTR//intron       25456834//25412662//24981863//25569111
chr1:56971262-56971263(-) m6A 5'UTR//intron       25456834//25412662//24981863//25569111
chr1:56971277-56971278(-) m6A 5'UTR//intron       25456834//25412662//24981863//25569111
chr1:56971292-56971293(-) m6A 5'UTR//intron       25456834//25412662//24981863//25569111
chr1:56971303-56971304(-) m6A 5'UTR//intron       25456834//25412662//24981863//25569111
chr1:56971475-56971476(-) m6A 5'UTR//intron       25412662//24981863
chr1:56971776-56971777(-) m6A 5'UTR//intron       25683224//25456834//24981863//25569111//22608085
chr1:56971789-56971790(-) m6A 5'UTR//intron       25683224//25456834//24981863//25569111//22608085
chr1:56971796-56971797(-) m6A 5'UTR//intron       25683224//25456834//24981863//25569111//22608085
chr1:56971825-56971826(-) m6A 5'UTR//intron       25683224//25456834//24981863//25569111//22608085
chr1:56971877-56971878(-) m6A 5'UTR//intron       25683224//25456834//24981863//25569111//22608085
chr1:56971936-56971937(-) m6A 5'UTR//intron       25456834//24981863//25569111
chr1:56972277-56972278(-) m6A 5'UTR//intron       25456834//25412662//24981863//25569111
chr1:56972282-56972283(-) m6A 5'UTR//intron       25456834//25412662//24981863//25569111
chr1:56972301-56972302(-) m6A 5'UTR//intron       25456834//25412662//24981863//25569111
chr1:56974277-56974278(-) m6A 5'UTR       24981863//25569111//22608085
chr1:56978458-56978459(-) m6A 5'UTR       24981863//22608085

Interaction Network (The top 100 interactions):


Interactor1: mcmv-miR-M23-2-3p
Interactor2: Satb2

Evidence Support:


Prediction-Evidence cRep
Support Database RepTar

Starting a new search, please wait ...