Basic Information:

  VIRBase ID:  

VHID00605793

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-M23-2-3p:  MIMAT0005545          Rasa2:  NM_053268     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-M23-2-3p	Rasa2
miRBase Accession/Entrez ID	MIMAT0005545	114713
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	5430433H21Rik//AA517451//AU023900//GAP//GAP1m

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	Rasa2	chr9:96453731(-) A-I      intronic chr9:96456430(-) A-I      intronic chr9:96453735(-) A-I      intronic chr9:96456491(-) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	Rasa2	chr9:96553312(-) A-I intron -    22524474 chr9:96553316(-) A-I intron -    22524474 chr9:96556011(-) A-I intron -    22524474 chr9:96556072(-) A-I intron -    22524474

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Rasa2	chr9:96539563-96539564(-) m6A 3'UTR       24981863 chr9:96542246-96542247(-) m6A 3'UTR       24981863 chr9:96552361-96552362(-) m6A 3'UTR//CDS       22608085 chr9:96552380-96552381(-) m6A 3'UTR//CDS       - chr9:96559240-96559241(-) m6A exon//intron       25456834//24981863 chr9:96559266-96559267(-) m6A exon//intron       25683224//25456834//24981863 chr9:96559277-96559278(-) m6A exon//intron       25683224//25456834//24981863 chr9:96559338-96559339(-) m6A exon//intron       25683224//25456834//24981863 chr9:96559358-96559359(-) m6A exon//intron       25683224//25456834//24981863 chr9:96559400-96559401(-) m6A exon//intron       25683224//25456834//24981863 chr9:96559454-96559455(-) m6A exon//intron       25683224//25456834//24981863 chr9:96559513-96559514(-) m6A exon//intron       25683224 chr9:96559580-96559581(-) m6A exon//intron       25683224 chr9:96559725-96559726(-) m6A exon//intron       25683224//25456834//25569111 chr9:96559774-96559775(-) m6A exon//intron       25683224//25456834//25569111 chr9:96559805-96559806(-) m6A exon//intron       25683224//24981863//25569111 chr9:96569778-96569779(-) m6A 3'UTR//CDS//exon       25569111//22608085 chr9:96570680-96570681(-) m6A 3'UTR//CDS//exon       25569111//22608085 chr9:96570715-96570716(-) m6A 3'UTR//CDS//exon       25569111//22608085 chr9:96631407-96631408(-) m6A CDS       25412662//22608085 chr9:96631428-96631429(-) m6A CDS       25412662//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Rasa2	Nucleus Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-M23-2-3p
Interactor2: Rasa2

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar