Basic Information:

  VIRBase ID:  

VHID00605748

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-M23-2-3p:  MIMAT0005545          Actn1:  NM_134156     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-M23-2-3p	Actn1
miRBase Accession/Entrez ID	MIMAT0005545	109711
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	3110023F10Rik//Actn1a

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Actn1	chr12:80168053-80168054(-) m6A 3'UTR       24981863//25456834 chr12:80168064-80168065(-) m6A 3'UTR       24981863//25456834 chr12:80173098-80173099(-) m6A CDS       25412662//24981863 chr12:80174090-80174091(-) m6A CDS       25412662//24981863//22608085 chr12:80174133-80174134(-) m6A CDS       25412662//24981863 chr12:80174169-80174170(-) m6A CDS       25412662//24981863 chr12:80174188-80174189(-) m6A CDS       24981863//22608085 chr12:80174463-80174464(-) m6A CDS       24981863//22608085 chr12:80177230-80177231(-) m6A CDS       25412662//22608085 chr12:80177287-80177288(-) m6A CDS       25412662//22608085 chr12:80178340-80178341(-) m6A CDS       25412662//22608085 chr12:80178416-80178417(-) m6A CDS       25412662//22608085 chr12:80181416-80181417(-) m6A CDS       25412662//22608085 chr12:80181478-80181479(-) m6A CDS       25412662 chr12:80183451-80183452(-) m6A CDS       25412662 chr12:80183525-80183526(-) m6A CDS       25412662//24981863//22608085 chr12:80183534-80183535(-) m6A CDS       25412662//24981863//22608085 chr12:80183567-80183568(-) m6A CDS       25412662//24981863//22608085 chr12:80184828-80184829(-) m6A CDS       25412662//24981863//22608085 chr12:80209405-80209406(-) m6A CDS       25683224//25412662//24981863//25569111 chr12:80209417-80209418(-) m6A CDS       25683224//25412662//24981863//25456834//25569111 chr12:80209430-80209431(-) m6A CDS       25683224//25412662//24981863//25456834//25569111 chr12:80260026-80260027(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr12:80260038-80260039(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr12:80260066-80260067(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr12:80260086-80260087(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr12:80260275-80260276(-) m6A 5'UTR       25683224//25412662//24981863//25456834//25569111

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Actn1	Nucleus Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-M23-2-3p
Interactor2: Actn1

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar