Basic Information:

  VIRBase ID:  

VHID00605515

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-M23-2-3p:  MIMAT0005545          Rdh10:  NM_133832     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-M23-2-3p	Rdh10
miRBase Accession/Entrez ID	MIMAT0005545	98711
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	3110069K09Rik//4921506A21Rik//AI875664//AW549993//D1Ertd762//D1Ertd762e//m366//m366Asp

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Rdh10	chr1:16105850-16105851(+) m6A 5'UTR       25683224//25456834//25412662//24981863//25569111 chr1:16105892-16105893(+) m6A 5'UTR       25683224//25456834//25412662//24981863//25569111 chr1:16105979-16105980(+) m6A 5'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr1:16106002-16106003(+) m6A 5'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr1:16106021-16106022(+) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr1:16106216-16106217(+) m6A CDS       25412662//24981863//25569111 chr1:16106242-16106243(+) m6A CDS       25683224//25412662//24981863//25569111 chr1:16106273-16106274(+) m6A CDS       25683224//25412662//24981863//25569111

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Rdh10	Nucleus Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-M23-2-3p
Interactor2: Rdh10

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar