Basic Information:

  VIRBase ID:  

VHID00605298

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-M23-2-3p:  MIMAT0005545          Srxn1:  NM_029688     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-M23-2-3p	Srxn1
miRBase Accession/Entrez ID	MIMAT0005545	76650
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	1700127B04Rik//AI854065//AW488194//N//Npn3//S//Sr//Srx//Srx1//TX01

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Srxn1	chr2:152105567-152105568(+) m6A 5'UTR//exon//intron       25412662//24981863//22608085 chr2:152105608-152105609(+) m6A 5'UTR//exon//intron       25412662//24981863 chr2:152105802-152105803(+) m6A CDS//intron       25412662//24981863//25569111 chr2:152105808-152105809(+) m6A CDS//intron       25412662//24981863//25569111 chr2:152105909-152105910(+) m6A CDS//intron       25683224//25412662//24981863//25569111//22608085 chr2:152105936-152105937(+) m6A CDS//intron       25683224//25412662//24981863//25569111//22608085 chr2:152108992-152108993(+) m6A CDS//exon       25683224//25412662//24981863//25569111//22608085 chr2:152109111-152109112(+) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr2:152109148-152109149(+) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr2:152109181-152109182(+) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr2:152109252-152109253(+) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//22608085 chr2:152109450-152109451(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr2:152109458-152109459(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr2:152109464-152109465(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr2:152109499-152109500(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr2:152109524-152109525(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr2:152109580-152109581(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960 chr2:152109588-152109589(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960 chr2:152109651-152109652(+) Y 3'UTR//exon       26075521 chr2:152109724-152109725(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960 chr2:152109748-152109749(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr2:152109757-152109758(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr2:152109780-152109781(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr2:152109800-152109801(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr2:152109881-152109882(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr2:152109891-152109892(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr2:152109933-152109934(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr2:152110015-152110016(+) m6A 3'UTR       24981863//25569111//22608085 chr2:152110044-152110045(+) m6A 3'UTR       24981863//25569111 chr2:152110692-152110693(+) m6A 3'UTR       25456834//24981863//25569111 chr2:152110713-152110714(+) m6A 3'UTR       25456834//24981863//25569111 chr2:152110723-152110724(+) m6A 3'UTR       25456834//24981863//25569111 chr2:152110768-152110769(+) m6A 3'UTR       25456834//24981863//25569111 chr2:152110872-152110873(+) m6A 3'UTR       24981863 chr2:152110984-152110985(+) m6A 3'UTR       25569111//22608085 chr2:152111039-152111040(+) m6A 3'UTR       25569111 chr2:152111092-152111093(+) m6A 3'UTR       25456834//24981863//25569111 chr2:152111177-152111178(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr2:152111188-152111189(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr2:152111224-152111225(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr2:152111287-152111288(+) m6A 3'UTR       25683224//24981863//25456834//25569111//22608085 chr2:152111305-152111306(+) Y 3'UTR//exon       26075521

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-M23-2-3p
Interactor2: Srxn1

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar