Detail Information

Basic Information:


  VIRBase ID:  

VHID00605180

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-M23-2-3p:           Crtc2:      

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Interactor Information:


Interactor1 Interactor2
Symbol mcmv-miR-M23-2-3p Crtc2
miRBase
Accession/Entrez ID
MIMAT0005545 74343
Organism Murid betaherpesvirus 1 Mus musculus
Category miRNA mRNA
Alias - 4632407F12Rik//Torc2

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase Crtc2
chr3:90254230-90254231(+) m6A 5'UTR       25412662//24981863
chr3:90254370-90254371(+) m6A 5'UTR//exon       25412662//24981863//25569111
chr3:90254541-90254542(+) m6A CDS//exon       24981863
chr3:90257130-90257131(+) m6A CDS//exon//intron       24981863
chr3:90260181-90260182(+) m6A CDS//exon       24981863
chr3:90260247-90260248(+) m6A CDS//exon       24981863
chr3:90260258-90260259(+) m6A CDS//exon       24981863
chr3:90261057-90261058(+) m6A CDS//exon//intron       25412662//24981863
chr3:90262559-90262560(+) Y CDS//exon       26075521
chr3:90263482-90263483(+) m6A 3'UTR//CDS//exon       25412662//24981863
chr3:90263618-90263619(+) m6A 3'UTR//CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085
chr3:90263671-90263672(+) m6A 3'UTR//CDS//exon       25683224//25456834//25412662//24981863//25569111
chr3:90263704-90263705(+) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111
chr3:90263772-90263773(+) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111
chr3:90263823-90263824(+) m6A 3'UTR//exon       25683224//25456834//24981863//25569111
chr3:90263928-90263929(+) m6A 3'UTR//exon       25683224//25456834//24981863

Interaction Network (The top 100 interactions):


Interactor1: mcmv-miR-M23-2-3p
Interactor2: Crtc2

Evidence Support:


Prediction-Evidence Rep
Support Database RepTar

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