Basic Information:

  VIRBase ID:  

VHID00604903

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-M23-2-3p:  MIMAT0005545          Tecpr1:  NM_001356993     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-M23-2-3p	Tecpr1
miRBase Accession/Entrez ID	MIMAT0005545	70381
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	2210010N04Rik//mKIAA1358

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	Tecpr1	chr5:144982756(-) A-I      intronic chr5:144963856(-) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	Tecpr1	chr5:144202987(-) A-I intron -    22524474

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Tecpr1	chr5:144194698-144194699(-) m6A 3'UTR       25456834//25412662//24981863//25569111//22608085 chr5:144194743-144194744(-) m6A 3'UTR       25456834//25412662//24981863//25569111 chr5:144194770-144194771(-) m6A 3'UTR       25456834//25412662//24981863//25569111 chr5:144194800-144194801(-) m6A 3'UTR       25456834//25412662//24981863//25569111 chr5:144194850-144194851(-) m6A 3'UTR       25456834//24981863//25569111 chr5:144194855-144194856(-) m6A 3'UTR       25456834//24981863//25569111 chr5:144194942-144194943(-) m6A 3'UTR       25683224//24981863//25569111 chr5:144195026-144195027(-) m6A 3'UTR       25683224//24981863 chr5:144195039-144195040(-) m6A 3'UTR       25683224//24981863 chr5:144195090-144195091(-) m6A 3'UTR       24981863 chr5:144195198-144195199(-) m6A 3'UTR       24981863 chr5:144195208-144195209(-) m6A 3'UTR       24981863 chr5:144195357-144195358(-) m6A 3'UTR//exon       25683224//24981863//25456834//25569111 chr5:144195370-144195371(-) m6A 3'UTR//exon       25683224//24981863//25456834//25569111 chr5:144195380-144195381(-) m6A 3'UTR//exon       25683224//24981863//25456834//25569111 chr5:144195408-144195409(-) m6A 3'UTR//exon       25683224//24981863//25569111 chr5:144195553-144195554(-) m6A 3'UTR//exon       25683224//24981863 chr5:144195571-144195572(-) m6A 3'UTR//exon       25683224//24981863 chr5:144195621-144195622(-) m6A 3'UTR//exon       25683224//24981863 chr5:144195753-144195754(-) m6A 3'UTR//exon       25683224//25412662//24981863//25569111 chr5:144195865-144195866(-) m6A 3'UTR//exon       25683224//25412662//24981863//25569111 chr5:144195871-144195872(-) m6A 3'UTR//exon       25683224//25412662//24981863//25569111 chr5:144195964-144195965(-) m6A CDS//exon       25683224//25412662//22608085 chr5:144196006-144196007(-) m6A CDS//exon       25683224//25412662//22608085 chr5:144196144-144196145(-) m6A CDS//exon       25683224//25412662//22608085 chr5:144196155-144196156(-) m6A CDS//exon       25683224//25412662//22608085 chr5:144199140-144199141(-) m6A CDS//exon       25412662 chr5:144206203-144206204(-) m6A CDS//exon       25412662//22608085 chr5:144206429-144206430(-) m6A CDS//exon       25412662//22608085 chr5:144207782-144207783(-) m6A exon//intron       25412662//22608085 chr5:144208644-144208645(-) m6A CDS//exon       25412662//22608085 chr5:144210069-144210070(-) m6A CDS//exon       25683224//25412662//24981863//25569111 chr5:144210126-144210127(-) m6A CDS//exon       25683224//25412662//24981863//25569111//22608085 chr5:144210185-144210186(-) m6A CDS//exon       25683224//25412662//24981863//25569111//22608085 chr5:144210195-144210196(-) m6A CDS//exon       25683224//25412662//24981863//25569111//22608085 chr5:144210227-144210228(-) m6A CDS//exon       25683224//25412662//24981863//25569111 chr5:144210239-144210240(-) m6A CDS//exon       25683224//25412662//24981863//25569111 chr5:144210265-144210266(-) m6A CDS//exon       25683224//25412662//24981863//25569111 chr5:144210277-144210278(-) m6A CDS//exon       25683224//25412662//24981863//25569111//22608085 chr5:144211474-144211475(-) m6A CDS//exon       25683224//25412662//22608085 chr5:144211527-144211528(-) m6A CDS//exon       25683224//25412662//22608085 chr5:144212284-144212285(-) m6A exon//intron       25412662 chr5:144212547-144212548(-) m6A exon//intron       25412662 chr5:144214062-144214063(-) m6A CDS//exon       25412662//22608085 chr5:144216297-144216298(-) m6A CDS//exon       25683224 chr5:144216351-144216352(-) m6A CDS//exon       25683224 chr5:144216915-144216916(-) m6A CDS//exon       25683224//22608085 chr5:144217216-144217217(-) m6A exon//intron       25412662 chr5:144217271-144217272(-) m6A CDS//exon       25412662//22608085 chr5:144217400-144217401(-) m6A CDS//exon       25412662//22608085 chr5:144218709-144218710(-) m6A CDS//exon       24981863//25569111 chr5:144223444-144223445(-) m6A exon//intron       25569111 chr5:144223519-144223520(-) m6A 5'UTR//exon       24981863//25569111 chr5:144223548-144223549(-) m6A 5'UTR//exon       24981863//25569111 chr5:144223560-144223561(-) m6A 5'UTR//exon       24981863//25569111

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-M23-2-3p
Interactor2: Tecpr1

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar