Basic Information:

  VIRBase ID:  

VHID00604801

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-M23-2-3p:  MIMAT0005545          Cdkal1:  NM_144536     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-M23-2-3p	Cdkal1
miRBase Accession/Entrez ID	MIMAT0005545	68916
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	1190005B03Rik//6620401C13Rik

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Cdkal1	chr13:29325322-29325323(-) m6A 3'UTR//intron       25456834//24981863//22608085 chr13:29325430-29325431(-) m6A 3'UTR//intron       25683224//25456834//24981863//25569111//22608085//22575960 chr13:29325438-29325439(-) m6A 3'UTR//intron       25683224//25456834//24981863//25569111//22608085//22575960 chr13:29325492-29325493(-) m6A 3'UTR//intron       25683224//25456834//24981863//25569111//22608085 chr13:29325514-29325515(-) m6A 3'UTR//intron       25683224//25456834//24981863//25569111//22608085 chr13:29325520-29325521(-) m6A 3'UTR//intron       25683224//25456834//24981863//25569111//22608085 chr13:29325533-29325534(-) m6A 3'UTR//intron       25683224//25456834//24981863//25569111//22608085 chr13:29325578-29325579(-) m6A 3'UTR//intron       25683224//25456834//24981863//25569111//22608085 chr13:29325616-29325617(-) m6A 3'UTR//intron       25456834//24981863//25569111 chr13:29325634-29325635(-) m6A 3'UTR//intron       25456834//24981863//25569111 chr13:29325826-29325827(-) m6A 3'UTR//intron       25683224//25456834//24981863//25569111//22608085 chr13:29325836-29325837(-) m6A 3'UTR//intron       25683224//25456834//24981863//25569111//22608085 chr13:29325854-29325855(-) m6A 3'UTR//intron       25683224//25456834//24981863//25569111//22608085 chr13:29325873-29325874(-) m6A 3'UTR//intron       25683224//25456834//24981863//25569111//22608085 chr13:29325937-29325938(-) m6A 3'UTR//intron       25683224//25456834//24981863//25569111//22608085 chr13:29325942-29325943(-) m6A 3'UTR//intron       25683224//25456834//24981863//25569111//22608085 chr13:29325954-29325955(-) m6A 3'UTR//intron       25683224//25456834//24981863//25569111//22608085 chr13:29325977-29325978(-) m6A 3'UTR//intron       25683224//25456834//24981863//25569111//22608085 chr13:29325985-29325986(-) m6A 3'UTR//intron       25683224//25456834//24981863//25569111//22608085 chr13:29326055-29326056(-) m6A CDS//intron       25456834//24981863//25569111 chr13:29552237-29552238(-) m6A 3'UTR//CDS//exon       25683224 chr13:29691685-29691686(-) m6A CDS//exon       25683224 chr13:29708889-29708890(-) m6A exon//intron       25683224 chr13:29708896-29708897(-) m6A exon//intron       25683224 chr13:29709103-29709104(-) m6A CDS//exon       25683224//22608085 chr13:29717735-29717736(-) m6A CDS//exon       25683224//22608085 chr13:29717748-29717749(-) m6A CDS//exon       25683224//22608085 chr13:29777225-29777226(-) m6A CDS//exon       25683224//22608085 chr13:29777237-29777238(-) m6A CDS//exon       25683224//22608085 chr13:29777267-29777268(-) m6A CDS//exon       25683224//22608085 chr13:29850031-29850032(-) m6A CDS//exon       25569111 chr13:29850080-29850081(-) Y CDS//exon       26075521 chr13:29854916-29854917(-) m6A 5'UTR//exon       25569111 chr13:29854923-29854924(-) m6A 5'UTR//exon       25569111 chr13:29855351-29855352(-) m6A 5'UTR//intron       25569111 chr13:29855392-29855393(-) m6A 5'UTR//intron       24981863 chr13:29855418-29855419(-) m6A 5'UTR//intron       24981863//25569111 chr13:29855565-29855566(-) m6A 5'UTR//exon       24981863//25569111 chr13:29855646-29855647(-) m6A 5'UTR//exon       24981863

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-M23-2-3p
Interactor2: Cdkal1

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar