Basic Information:

  VIRBase ID:  

VHID00604469

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-M23-2-3p:  MIMAT0005545          Arl6ip6:  NM_022989     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-M23-2-3p	Arl6ip6
miRBase Accession/Entrez ID	MIMAT0005545	65103
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	2310057C01Rik//2610529A11Rik//Ai//Aip-6

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Arl6ip6	chr2:53191730-53191731(+) m6A exon       25683224//25456834//25412662//24981863//25569111//22608085 chr2:53191778-53191779(+) m6A exon       25683224//25456834//25412662//24981863//25569111//22608085 chr2:53191804-53191805(+) m6A exon       25683224//25456834//25412662//24981863//25569111//22608085 chr2:53191857-53191858(+) m6A exon       25683224//25456834//25412662//24981863//25569111//22608085 chr2:53192103-53192104(+) m6A 5'UTR//intron       25683224//25456834//25412662//24981863//25569111//22608085 chr2:53192225-53192226(+) m6A CDS//intron       25412662//24981863//25456834//25569111//22608085 chr2:53192320-53192321(+) m6A CDS//intron       25412662//24981863//25456834//25569111 chr2:53192416-53192417(+) m6A CDS//intron       25569111 chr2:53217297-53217298(+) m6A CDS//exon       25456834//24981863//25569111 chr2:53217306-53217307(+) m6A CDS//exon       25456834//24981863//25569111 chr2:53217388-53217389(+) m6A 3'UTR//exon       25456834//24981863//25569111//22608085 chr2:53217466-53217467(+) m6A 3'UTR//exon       25456834//24981863//25569111//22608085 chr2:53217509-53217510(+) m6A 3'UTR//exon       25456834//24981863//25569111

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Arl6ip6	Nucleus Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-M23-2-3p
Interactor2: Arl6ip6

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar