Detail Information

Basic Information:


  VIRBase ID:  

VHID00604269

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-M23-2-3p:           Rhog:      

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Interactor Information:


Interactor1 Interactor2
Symbol mcmv-miR-M23-2-3p Rhog
miRBase
Accession/Entrez ID
MIMAT0005545 56212
Organism Murid betaherpesvirus 1 Mus musculus
Category miRNA mRNA
Alias - 2810426G09Rik//Ar//Arhg//Rh//Sid107//Sid10750

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase Rhog
chr7:102239138-102239139(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960
chr7:102239211-102239212(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960
chr7:102239306-102239307(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960
chr7:102239342-102239343(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22575960
chr7:102239554-102239555(-) m6A 3'UTR       24981863//25569111//22608085//22575960
chr7:102239581-102239582(-) m6A 3'UTR       24981863//25569111//22608085//22575960
chr7:102239891-102239892(-) m6A CDS       25683224//25412662//24981863//25456834//25569111
chr7:102240021-102240022(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960
chr7:102240074-102240075(-) m6A CDS       25683224//25456834//24981863//25569111//22608085//22575960
chr7:102240083-102240084(-) m6A CDS       25683224//25456834//24981863//25569111//22608085//22575960
chr7:102240089-102240090(-) m6A CDS       25683224//25456834//24981863//25569111//22608085//22575960
chr7:102249382-102249383(-) m6A 5'UTR//intron       25412662//24981863//25569111
chr7:102256011-102256012(-) m6A 5'UTR       24981863
chr7:102256016-102256017(-) m6A 5'UTR       24981863

Interaction Network (The top 100 interactions):


Interactor1: mcmv-miR-M23-2-3p
Interactor2: Rhog

Evidence Support:


Prediction-Evidence cRep
Support Database RepTar

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