Basic Information:

  VIRBase ID:  

VHID00603963

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-M23-2-3p:  MIMAT0005545          Vax2:  NM_011912     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-M23-2-3p	Vax2
miRBase Accession/Entrez ID	MIMAT0005545	24113
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	Dres93

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Vax2	chr6:83711321-83711322(+) m6A CDS       25683224//25412662//24981863//25569111 chr6:83711440-83711441(+) m6A CDS       25683224//25412662//25569111 chr6:83711483-83711484(+) m6A CDS       25683224//25412662//25569111 chr6:83711493-83711494(+) m6A CDS       25683224//25412662//25569111 chr6:83711512-83711513(+) m6A CDS       25683224//25412662//25569111 chr6:83733109-83733110(+) m6A CDS       25683224//25412662 chr6:83733269-83733270(+) m6A CDS       - chr6:83733280-83733281(+) m6A CDS       - chr6:83737558-83737559(+) m6A CDS       25412662 chr6:83737566-83737567(+) m6A CDS       25412662 chr6:83737582-83737583(+) m6A CDS       25683224//25412662 chr6:83737594-83737595(+) m6A CDS       25683224//25412662 chr6:83737664-83737665(+) m6A CDS       25683224//25412662 chr6:83737774-83737775(+) m6A CDS       25683224//25412662//25569111 chr6:83737873-83737874(+) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr6:83737892-83737893(+) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr6:83737925-83737926(+) m6A CDS       25683224//25456834//24981863//25569111 chr6:83737931-83737932(+) m6A CDS       25683224//25456834//24981863//25569111 chr6:83738050-83738051(+) m6A 3'UTR       25683224//25456834//24981863//25569111 chr6:83738128-83738129(+) m6A 3'UTR       25456834//24981863//25569111 chr6:83738133-83738134(+) m6A 3'UTR       25456834//24981863//25569111

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Vax2	Cytoplasm Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-M23-2-3p
Interactor2: Vax2

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar