Basic Information:

  VIRBase ID:  

VHID00603609

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-M23-2-3p:  MIMAT0005545          Rorc:  NR_121656     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-M23-2-3p	Rorc
miRBase Accession/Entrez ID	MIMAT0005545	19885
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	Nr1f3//ROR//RORgamma//Th//Thor//TOR

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Rorc	chr3:94372895-94372896(+) m6A CDS       25412662 chr3:94372911-94372912(+) m6A CDS       25412662 chr3:94372921-94372922(+) m6A CDS       25412662 chr3:94375054-94375055(+) m6A CDS       25412662 chr3:94377447-94377448(+) m6A 5'UTR//intron       25412662 chr3:94377463-94377464(+) m6A 5'UTR//exon//intron       25412662 chr3:94387534-94387535(+) m6A CDS//exon       25412662 chr3:94388786-94388787(+) m6A CDS//exon       25412662 chr3:94388811-94388812(+) m6A CDS//exon       25412662 chr3:94388838-94388839(+) m6A CDS//exon       25412662 chr3:94388851-94388852(+) m6A CDS//exon       25412662 chr3:94388879-94388880(+) m6A CDS//exon       25412662 chr3:94389135-94389136(+) m6A CDS//exon       25412662 chr3:94389151-94389152(+) m6A CDS//exon       25412662 chr3:94389165-94389166(+) m6A CDS//exon       25412662 chr3:94389174-94389175(+) m6A CDS//exon       25412662 chr3:94389180-94389181(+) m6A CDS//exon       25412662 chr3:94389191-94389192(+) m6A CDS//exon       25412662 chr3:94389251-94389252(+) m6A CDS//exon       25412662 chr3:94389512-94389513(+) m6A CDS//exon       25412662 chr3:94389534-94389535(+) m6A CDS//exon       25412662 chr3:94390412-94390413(+) m6A exon//intron       25412662 chr3:94390461-94390462(+) m6A exon//intron       25412662 chr3:94393064-94393065(+) m6A CDS//exon//intron       25412662 chr3:94393085-94393086(+) m6A CDS//exon//intron       25412662 chr3:94393113-94393114(+) m6A CDS//exon//intron       25412662 chr3:94397208-94397209(+) m6A CDS//exon       25683224 chr3:94397307-94397308(+) m6A CDS//exon       25683224//25412662 chr3:94397365-94397366(+) m6A 3'UTR//exon       25683224//25412662 chr3:94397407-94397408(+) m6A 3'UTR//exon       25683224//25456834//25412662//26404942//22608085 chr3:94397480-94397481(+) m6A 3'UTR//exon       25683224//25456834//25412662//26404942 chr3:94397513-94397514(+) m6A 3'UTR//exon       25683224//25456834//25412662//26404942 chr3:94397634-94397635(+) m6A 3'UTR//exon       25683224//22608085 chr3:94397683-94397684(+) m6A 3'UTR       22608085 chr3:94397760-94397761(+) m6A 3'UTR       22608085 chr3:94397779-94397780(+) m6A 3'UTR       22608085

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-M23-2-3p
Interactor2: Rorc

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar