Detail Information

Basic Information:


  VIRBase ID:  

VHID00603176

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-M23-2-3p:           Itgb3:      

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Interactor Information:


Interactor1 Interactor2
Symbol mcmv-miR-M23-2-3p Itgb3
miRBase
Accession/Entrez ID
MIMAT0005545 16416
Organism Murid betaherpesvirus 1 Mus musculus
Category miRNA mRNA
Alias - CD61//GP3A//INGRB3

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase Itgb3
chr11:104642313-104642314(+) m6A CDS//exon       25569111
chr11:104643660-104643661(+) m6A CDS//exon       25456834//25412662//24981863//25569111
chr11:104643752-104643753(+) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111
chr11:104658746-104658747(+) m6A CDS//exon       25683224
chr11:104658764-104658765(+) m6A CDS//exon       25683224
chr11:104658769-104658770(+) m6A CDS//exon       25683224
chr11:104665627-104665628(+) m6A CDS//exon       25569111
chr11:104667083-104667084(+) m6A CDS//exon       25569111
chr11:104667139-104667140(+) m6A CDS//exon       25569111
chr11:104667149-104667150(+) m6A 3'UTR//exon       25569111
chr11:104667171-104667172(+) m6A 3'UTR//exon       24981863//25569111
chr11:104667179-104667180(+) m6A 3'UTR//exon       24981863//25569111
chr11:104667205-104667206(+) m6A 3'UTR//exon       24981863//25456834//25569111

Interaction Network (The top 100 interactions):


Interactor1: mcmv-miR-M23-2-3p
Interactor2: Itgb3

Evidence Support:


Prediction-Evidence cRep//Rep
Support Database RepTar

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