Detail Information

Basic Information:


  VIRBase ID:  

VHID00602556

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-M23-2-3p:           Adcy9:      

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Interactor Information:


Interactor1 Interactor2
Symbol mcmv-miR-M23-2-3p Adcy9
miRBase
Accession/Entrez ID		 MIMAT0005545 11515
Organism Murid betaherpesvirus 1 Mus musculus
Category miRNA mRNA
Alias - AC9//ACtp//ACtp10//AW125421//D16Wsu65//D16Wsu65e//mKIAA0520

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase Adcy9
chr16:4287857-4287858(-) m6A 3'UTR       25456834//24981863//25569111//22608085
chr16:4287930-4287931(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085
chr16:4287955-4287956(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960
chr16:4287967-4287968(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960
chr16:4288093-4288094(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960
chr16:4288177-4288178(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960
chr16:4288219-4288220(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960
chr16:4288244-4288245(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960
chr16:4288277-4288278(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960
chr16:4288366-4288367(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960
chr16:4288393-4288394(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960
chr16:4288449-4288450(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960
chr16:4288597-4288598(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960
chr16:4288634-4288635(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960
chr16:4288660-4288661(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960
chr16:4288738-4288739(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960
chr16:4288801-4288802(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085
chr16:4288814-4288815(-) m6A CDS       25683224//25412662//24981863//25569111//22608085
chr16:4288858-4288859(-) m6A CDS       25683224//25412662//24981863//25569111//22608085
chr16:4288882-4288883(-) m6A CDS       25683224//25412662//24981863//25569111//22608085
chr16:4288969-4288970(-) m6A CDS       25683224//25412662//25569111
chr16:4289077-4289078(-) m6A CDS       25683224//22608085
chr16:4294680-4294681(-) m6A CDS       25683224//22608085
chr16:4320540-4320541(-) m6A intron       24981863
chr16:4323948-4323949(-) m6A CDS       24981863//22608085
chr16:4418001-4418002(-) m6A CDS       25456834//25412662//24981863//25569111//22608085//22575960
chr16:4418065-4418066(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960
chr16:4418091-4418092(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960
chr16:4418175-4418176(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960
chr16:4418217-4418218(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960
chr16:4418248-4418249(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960
chr16:4418349-4418350(-) m6A CDS       25456834//25412662//24981863//25569111//22608085
chr16:4418442-4418443(-) m6A CDS       24981863//25569111//22608085
chr16:4418501-4418502(-) m6A CDS       24981863//25569111//22608085
chr16:4418603-4418604(-) m6A CDS       25683224//24981863//25569111//22608085
chr16:4418745-4418746(-) m6A CDS       24981863//25569111
chr16:4418773-4418774(-) m6A CDS       24981863//25569111
chr16:4418901-4418902(-) m6A 5'UTR//CDS       24981863//25569111
chr16:4418959-4418960(-) m6A 5'UTR//CDS       25683224//25412662//24981863//25569111
chr16:4419022-4419023(-) m6A CDS//intron       25683224//25412662//24981863//25569111
chr16:4419211-4419212(-) m6A 5'UTR//CDS       25683224//25456834//25412662//24981863//25569111//22608085
chr16:4419249-4419250(-) m6A 5'UTR//CDS       25683224//25456834//25412662//24981863//25569111//22608085
chr16:4419270-4419271(-) m6A 5'UTR//CDS       25683224//25456834//25412662//24981863//25569111//22608085
chr16:4419320-4419321(-) m6A 5'UTR//CDS       25683224//25456834//25412662//24981863//25569111//22608085
chr16:4419369-4419370(-) m6A 5'UTR//CDS       25683224//25412662//24981863//25569111//22608085
chr16:4419474-4419475(-) m6A 5'UTR//CDS       25683224//25412662//24981863//25569111
chr16:4419790-4419791(-) m6A 5'UTR       25412662//24981863//25569111
chr16:4419814-4419815(-) m6A 5'UTR       25412662//24981863
chr16:4419821-4419822(-) m6A 5'UTR       25412662//24981863
chr16:4419913-4419914(-) m6A 5'UTR       25412662//24981863
chr16:4420143-4420144(-) m6A 5'UTR       25412662//24981863

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate Adcy9
Nucleus Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):


Interactor1: mcmv-miR-M23-2-3p
Interactor2: Adcy9

Evidence Support:


Prediction-Evidence cRep//Rep
Support Database RepTar

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