Basic Information:

  VIRBase ID:  

VHID00602534

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-M23-2-3p:  MIMAT0005545          Abl1:  NM_001283047     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-M23-2-3p	Abl1
miRBase Accession/Entrez ID	MIMAT0005545	11350
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	Abl//AI325092//c-A//c-Abl//E430008G22Rik

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Abl1	chr2:31688425-31688426(+) m6A exon       25412662//25569111 chr2:31688452-31688453(+) m6A exon       25412662//24981863//25569111 chr2:31688474-31688475(+) m6A exon       25412662//24981863//25569111 chr2:31688608-31688609(+) m6A 5'UTR//exon       25683224//25456834//25412662//24981863//25569111 chr2:31688635-31688636(+) m6A 5'UTR//exon       25683224//25456834//25412662//24981863//25569111 chr2:31688685-31688686(+) m6A 5'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr2:31688758-31688759(+) m6A 5'UTR//exon       25683224//25456834//25412662//24981863//25569111 chr2:31688822-31688823(+) m6A 5'UTR//exon       25683224//25412662//24981863//25569111 chr2:31688867-31688868(+) m6A 5'UTR//exon       25683224//25412662//24981863//25569111 chr2:31688902-31688903(+) m6A 5'UTR//exon       25683224//25412662//24981863//25569111 chr2:31688983-31688984(+) m6A 5'UTR//exon       25683224//25412662//24981863//25569111 chr2:31689036-31689037(+) m6A 5'UTR//exon       25683224//25412662//24981863//25569111 chr2:31689156-31689157(+) m6A 5'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr2:31689210-31689211(+) m6A 5'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr2:31689351-31689352(+) m6A 5'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr2:31689540-31689541(+) m6A 5'UTR//exon       25683224//25456834//24981863//25569111//22608085 chr2:31689555-31689556(+) m6A 5'UTR//exon       25683224//25456834//24981863//25569111//22608085 chr2:31689585-31689586(+) m6A 5'UTR//exon       25683224//25456834//24981863//25569111//22608085 chr2:31689632-31689633(+) m6A 5'UTR//exon       25683224//25456834//24981863//25569111//22608085 chr2:31689639-31689640(+) m6A 5'UTR//exon       25683224//25456834//24981863//25569111//22608085 chr2:31689751-31689752(+) m6A 5'UTR//exon       25683224//25456834//24981863//25569111//22608085 chr2:31689771-31689772(+) m6A 5'UTR//exon       25683224//25456834//24981863//25569111//22608085 chr2:31689837-31689838(+) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr2:31689894-31689895(+) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr2:31689937-31689938(+) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr2:31690564-31690565(+) m6A CDS//intron       25683224//25456834//25412662//24981863//25569111//22608085 chr2:31690634-31690635(+) m6A 3'UTR//intron       25683224//25412662 chr2:31690641-31690642(+) m6A 3'UTR//intron       25683224//25412662 chr2:31707068-31707069(+) m6A exon//intron       25412662 chr2:31760033-31760034(+) m6A 5'UTR//intron       25683224//25412662 chr2:31760234-31760235(+) m6A 5'UTR//intron       25412662 chr2:31784770-31784771(+) m6A 3'UTR//CDS       25683224//25412662//22608085 chr2:31790236-31790237(+) m6A exon//intron       25683224//25412662 chr2:31790255-31790256(+) m6A exon//intron       25683224 chr2:31790274-31790275(+) m6A 3'UTR//CDS//exon       25683224 chr2:31790718-31790719(+) m6A 3'UTR//CDS//exon       25683224 chr2:31790727-31790728(+) m6A 3'UTR//CDS//exon       25683224 chr2:31790826-31790827(+) m6A 3'UTR//CDS//exon       25683224//22608085 chr2:31792239-31792240(+) m6A 3'UTR//CDS//exon       25683224//22608085 chr2:31792254-31792255(+) m6A 3'UTR//CDS//exon       25683224//22608085 chr2:31792272-31792273(+) m6A 3'UTR//CDS//exon       25683224//22608085 chr2:31792323-31792324(+) m6A 3'UTR//CDS//exon       25683224 chr2:31792367-31792368(+) m6A 3'UTR//CDS//exon       25683224 chr2:31794634-31794635(+) m6A 3'UTR//CDS       25683224 chr2:31796667-31796668(+) m6A exon//intron       25683224//25412662 chr2:31796716-31796717(+) m6A exon//intron       25683224//25412662 chr2:31796984-31796985(+) m6A 3'UTR//CDS//exon       25683224//25412662 chr2:31797031-31797032(+) m6A 3'UTR//CDS//exon       25683224//25412662//24981863//25569111 chr2:31797642-31797643(+) m6A 3'UTR//CDS//exon       25683224//25412662//24981863//25569111 chr2:31797648-31797649(+) m6A 3'UTR//CDS//exon       25683224//25412662//24981863//25569111 chr2:31797765-31797766(+) m6A exon//intron       25683224//25412662//24981863//25569111 chr2:31797876-31797877(+) m6A exon//intron       25412662 chr2:31797893-31797894(+) m6A exon//intron       25412662 chr2:31797975-31797976(+) m6A exon//intron       25683224//25412662//24981863//25569111 chr2:31797984-31797985(+) m6A exon//intron       25683224//25412662//24981863//25569111 chr2:31800214-31800215(+) m6A 3'UTR//CDS       25683224//25412662//24981863//25569111 chr2:31800307-31800308(+) m6A 3'UTR//CDS       25683224//25412662//24981863//25569111 chr2:31800315-31800316(+) m6A 3'UTR//CDS       25683224//25412662//24981863//25569111 chr2:31800412-31800413(+) m6A CDS       25683224//25412662//24981863//25456834//25569111//22575960 chr2:31800446-31800447(+) m6A CDS       25683224//25412662//24981863//25456834//25569111//22575960 chr2:31800458-31800459(+) m6A CDS       25683224//25412662//24981863//25456834//25569111//22575960 chr2:31800706-31800707(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr2:31800739-31800740(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr2:31800910-31800911(+) m1A CDS       26863196 chr2:31800922-31800923(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr2:31800968-31800969(+) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr2:31801056-31801057(+) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr2:31801171-31801172(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr2:31801293-31801294(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr2:31801327-31801328(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr2:31801364-31801365(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr2:31801425-31801426(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr2:31801486-31801487(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr2:31801548-31801549(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr2:31801606-31801607(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr2:31801642-31801643(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr2:31801690-31801691(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr2:31801720-31801721(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr2:31801741-31801742(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr2:31801843-31801844(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr2:31801966-31801967(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr2:31801973-31801974(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr2:31802014-31802015(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr2:31802034-31802035(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr2:31802164-31802165(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr2:31802215-31802216(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr2:31802279-31802280(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr2:31802344-31802345(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr2:31802450-31802451(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr2:31802519-31802520(+) m6A 3'UTR       25683224//25412662//24981863//25569111//22608085 chr2:31802580-31802581(+) m6A 3'UTR       25683224//24981863//25569111 chr2:31802739-31802740(+) m6A 3'UTR       25683224//24981863//25569111 chr2:31802756-31802757(+) m6A 3'UTR       25683224//24981863//25569111 chr2:31802801-31802802(+) m6A 3'UTR       25683224//24981863//25569111 chr2:31802822-31802823(+) m6A 3'UTR       25683224//24981863//25412662//25569111 chr2:31802887-31802888(+) m6A 3'UTR       25683224//24981863//25456834//25412662//25569111 chr2:31802929-31802930(+) m6A 3'UTR       25683224//24981863//25456834//25412662//25569111 chr2:31803016-31803017(+) m6A 3'UTR       25683224//25569111//22608085 chr2:31803053-31803054(+) m6A 3'UTR       25683224//25569111//22608085 chr2:31803367-31803368(+) m6A 3'UTR       25569111 chr2:31803801-31803802(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111 chr2:31803808-31803809(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111 chr2:31803833-31803834(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111 chr2:31803988-31803989(+) m6A 3'UTR       25569111

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Abl1	Nucleus Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-M23-2-3p
Interactor2: Abl1

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar